Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC008739.2-201ENST00000597006 317 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RNU6-666P-201ENST00000363499 107 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RNU6-1222P-201ENST00000384615 107 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RPL21P32-201ENST00000419877 477 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AL353689.1-201ENST00000438895 199 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 RPL31P60-201ENST00000478450 367 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AC018437.1-201ENST00000492214 406 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 LINC02211-204ENST00000642024 1070 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 AC073544.1-201ENST00000600110 1595 ntBASIC0.42□□□□□ -2.34
VPS13DQ5THJ4 SNORA25.8-201ENST00000364831 128 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 RNU6-193P-201ENST00000410977 107 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SNORA48.9-201ENST00000516419 162 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SNORD39.2-201ENST00000579995 76 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC090616.3-201ENST00000582184 217 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC022387.2-201ENST00000604050 448 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 PRR13P7-201ENST00000605538 430 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 MIR6866-201ENST00000638146 69 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 BTF3L4P2-201ENST00000392798 346 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 OR5H4P-201ENST00000510851 923 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 MTND4LP5-201ENST00000605152 292 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 MIR508-201ENST00000384857 115 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 UBE2V2P3-201ENST00000433562 437 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC079148.1-201ENST00000565944 819 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AGGF1P5-201ENST00000567900 919 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC123912.3-201ENST00000600907 1367 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SSXP10-201ENST00000402595 565 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 MTND5P15-201ENST00000434246 349 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC004854.1-201ENST00000440356 349 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SNORD14A-201ENST00000606526 91 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AC007038.2-201ENST00000608095 740 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 AL118508.4-201ENST00000624142 1176 ntBASIC0.41□□□□□ -2.34
VPS13DQ5THJ4 SNORA16B-201ENST00000364674 135 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 COL6A4P2-205ENST00000509855 506 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 SFR1P1-201ENST00000403720 688 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 AC083865.1-201ENST00000636634 831 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 AC009812.4-201ENST00000569134 1805 ntBASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.4□□□□□ -2.35
VPS13DQ5THJ4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AL773524.1-201ENST00000614065 229 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 PABPC1P3-201ENST00000469174 459 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 RPL30P14-201ENST00000482744 348 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 CST2P1-201ENST00000425770 87 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AC016691.1-201ENST00000441321 413 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 RNU7-26P-201ENST00000458980 63 ntBASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.39□□□□□ -2.35
VPS13DQ5THJ4 OR4G2P-201ENST00000328113 903 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 PRELID3BP1-201ENST00000457142 540 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC091925.2-201ENST00000625059 256 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 SNORA22-201ENST00000383907 134 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 SNORA22C-201ENST00000384614 134 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 MIR515-2-201ENST00000384883 83 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 MIR515-1-201ENST00000384884 83 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 SEPT2P1-201ENST00000419651 180 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 RPS20P20-201ENST00000460498 340 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 HMGN1P10-201ENST00000474557 553 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 RNU6-496P-201ENST00000516145 99 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AL132857.1-201ENST00000555180 708 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 NUTF2P8-201ENST00000604593 363 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 RNU6-600P-201ENST00000362524 99 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AL031663.1-201ENST00000437445 219 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms