Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 XKRY2-202ENST00000623874 1581 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 XKRY-202ENST00000624960 1581 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 MT-TQ-201ENST00000387372 72 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 RPS26P21-201ENST00000475397 348 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 SNORD114-2-201ENST00000363953 78 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 SNORA23-201ENST00000365128 182 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 MTATP6P23-201ENST00000440153 476 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 C1DP3-201ENST00000455013 423 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AC112198.4-201ENST00000515450 351 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 MIR4305-201ENST00000583252 102 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AC080100.1-201ENST00000624239 5356 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 MTND5P11-201ENST00000511037 1812 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 RNU1-62P-201ENST00000362599 164 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 SNORD14B-201ENST00000364533 90 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 RPS26P42-201ENST00000413485 326 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 USP9YP21-201ENST00000420603 432 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 EIF1P1-201ENST00000421436 341 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AL662814.1-201ENST00000617364 121 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 RNA5SP295-201ENST00000362655 121 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 SNORD3E-201ENST00000362899 217 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 SNORA62.1-201ENST00000364287 154 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 RNU6-45P-201ENST00000384471 107 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AC074117.2-201ENST00000417130 397 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 ARF4P4-201ENST00000439608 520 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 COX7A2P2-201ENST00000505291 250 ntBASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.44□□□□□ -2.34
UBR4Q5T4S7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 Y_RNA.53-201ENST00000362765 102 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 USP9YP7-201ENST00000436723 430 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 USP9YP32-201ENST00000452432 430 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC012170.1-201ENST00000495139 359 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 MIR514B-201ENST00000516774 80 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RNU6-158P-201ENST00000517104 100 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC125611.2-201ENST00000551907 647 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 VN1R79P-201ENST00000593540 513 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 Y_RNA.421-201ENST00000384052 101 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RNU1-52P-201ENST00000384190 164 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RPS20P15-201ENST00000412792 311 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 MORF4L1P7-201ENST00000426038 703 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC107015.1-201ENST00000466902 747 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RN7SKP179-201ENST00000516126 217 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC009974.1-201ENST00000608881 455 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RNU1-109P-201ENST00000383960 147 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 USP9YP18-201ENST00000425912 695 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RSU1P2-202ENST00000437884 485 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 SNORD97-201ENST00000459187 142 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 LINC00557-201ENST00000563184 1279 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AL591926.4-201ENST00000616895 298 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 SNORA63.3-201ENST00000362682 132 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 MIR508-201ENST00000384857 115 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 RNU6-491P-201ENST00000516099 110 ntBASIC0.43□□□□□ -2.34
UBR4Q5T4S7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.43□□□□□ -2.34
UBR4Q5T4S7 MIR150-201ENST00000385048 84 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 MIR591-201ENST00000385290 95 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 HSPE1P9-201ENST00000440046 311 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AL645638.1-201ENST00000440519 361 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AC083923.1-201ENST00000523708 376 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 ZNF204P-201ENST00000416749 2397 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AC015922.2-201ENST00000435593 184 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 RPL23AP54-201ENST00000495129 419 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AC090115.3-201ENST00000553218 849 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 Y_RNA.78-201ENST00000362970 110 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 RNA5SP451-201ENST00000410588 110 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 MTND4LP11-201ENST00000422184 280 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 NDUFS5P3-201ENST00000450668 321 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 AL137072.1-201ENST00000603444 466 ntBASIC0.42□□□□□ -2.34
UBR4Q5T4S7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
UBR4Q5T4S7 SNORA62.2-201ENST00000364672 152 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 RNA5SP239-201ENST00000410218 129 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 RPS15AP5-201ENST00000436276 388 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 MTND5P14-201ENST00000441481 1267 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 PAXBP1P1-201ENST00000449315 447 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 MRPS33P3-201ENST00000513456 322 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 FAM157B-203ENST00000639350 358 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 RNY4P28-201ENST00000365281 93 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.41□□□□□ -2.34
UBR4Q5T4S7 BZW1P2-201ENST00000473537 826 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 MIR6715B-201ENST00000637172 77 ntBASIC0.41□□□□□ -2.34
UBR4Q5T4S7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms