Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 MIR133B-201ENST00000362210 119 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 RNY1P10-201ENST00000363268 113 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 RNU6-1310P-201ENST00000384153 107 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 SNORA16A-201ENST00000384342 137 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 MIR92A2-201ENST00000385299 75 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 MIR765-201ENST00000390226 114 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 U3.19-201ENST00000390893 196 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 RPL21P67-201ENST00000402896 478 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 AL589765.3-201ENST00000446084 462 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 AZGP1P2-201ENST00000454506 345 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 RPS21P4-201ENST00000487122 248 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 RN7SL447P-201ENST00000494711 245 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VARS2Q5ST30 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 AC232271.1-201ENST00000602455 2715 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 AC239868.2-201ENST00000564237 4527 ntBASIC5.87□□□□□ -1.47
VARS2Q5ST30 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VARS2Q5ST30 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VARS2Q5ST30 SNORA17.1-201ENST00000362945 126 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 RNA5SP339-201ENST00000390987 122 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 AP000936.3-201ENST00000438127 255 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 AC006466.1-201ENST00000438721 289 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 AC010469.1-201ENST00000463864 576 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 RN7SL585P-201ENST00000470538 280 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VARS2Q5ST30 AC144833.1-201ENST00000567953 4089 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 THAP12P5-201ENST00000405864 2275 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARS2Q5ST30 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VARS2Q5ST30 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VARS2Q5ST30 SAGE2P-201ENST00000420011 2126 ntBASIC5.86□□□□□ -1.47
VARS2Q5ST30 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.86□□□□□ -1.47
VARS2Q5ST30 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 RNU6-78P-201ENST00000362897 107 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 RNU6-105P-201ENST00000363909 104 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 RNU6-1336P-201ENST00000383886 109 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 RNU6-1113P-201ENST00000384348 107 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 MIR34A-201ENST00000385130 110 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 SNORD12C-201ENST00000386307 89 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 SNORA11-201ENST00000408789 128 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AL391219.1-201ENST00000422570 483 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AL358075.3-201ENST00000426289 226 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 RPL30P12-201ENST00000474666 353 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 RPL23AP70-201ENST00000483361 460 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 HIGD1AP3-201ENST00000515857 278 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 SNORA31.22-201ENST00000517204 135 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 MIR4436B2-201ENST00000581415 91 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 MIR4436B1-201ENST00000583272 91 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AL355812.1-201ENST00000603215 216 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AC105254.2-201ENST00000603636 436 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AC241585.2-209ENST00000638217 143 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 AC140134.1-201ENST00000511830 3544 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC5.85□□□□□ -1.47
VARS2Q5ST30 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VARS2Q5ST30 DNM1P47-203ENST00000571780 12667 ntBASIC5.85□□□□□ -1.47
VARS2Q5ST30 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VARS2Q5ST30 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VARS2Q5ST30 RNU6-821P-201ENST00000390995 107 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms