Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL831737.1-201ENST00000441288 271 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC025750.2-201ENST00000442609 450 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX4Q33E94 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX4Q33E94 AC233279.1-201ENST00000455300 423 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.22□□□□□ -2.05
RFX4Q33E94 AC068587.2-201ENST00000478386 781 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 LINC00888-204ENST00000487386 421 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX4Q33E94 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 Y_RNA.717-201ENST00000517106 92 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 SUB1P1-201ENST00000524415 382 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFX4Q33E94 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFX4Q33E94 AC123904.2-201ENST00000548059 300 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX4Q33E94 AC002400.1-201ENST00000569310 726 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC002545.1-201ENST00000592511 181 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC068790.3-201ENST00000602988 553 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC112187.2-201ENST00000604345 283 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC087683.2-201ENST00000611384 326 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC073308.1-201ENST00000623696 305 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC006386.2-201ENST00000624491 75 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC012005.1-201ENST00000624575 75 ntBASIC2.22□□□□□ -2.05
RFX4Q33E94 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX4Q33E94 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFX4Q33E94 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
RFX4Q33E94 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RNU6-525P-201ENST00000363685 104 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RNU5A-8P-201ENST00000364102 114 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFX4Q33E94 RNU2-52P-201ENST00000410680 190 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX4Q33E94 AL358075.3-201ENST00000426289 226 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX4Q33E94 USP12PX-201ENST00000432383 1057 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.21□□□□□ -2.06
RFX4Q33E94 UBE2D3P1-201ENST00000436669 444 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX4Q33E94 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX4Q33E94 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX4Q33E94 RPL12P25-201ENST00000455592 494 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RPL23AP45-201ENST00000476406 468 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 EIF4EP3-201ENST00000498782 656 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 MRPS36P2-201ENST00000512569 299 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX4Q33E94 AC116347.2-201ENST00000514912 523 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RN7SKP24-201ENST00000515888 284 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RNU6-678P-201ENST00000516832 109 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.21□□□□□ -2.06
RFX4Q33E94 COX6CP5-201ENST00000527162 228 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AL391261.3-201ENST00000557194 520 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
RFX4Q33E94 AL356432.3-201ENST00000568952 465 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AC105137.2-201ENST00000569073 466 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 LARP7P3-201ENST00000579888 337 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AL121917.1-203ENST00000605534 577 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 OR10AB1P-201ENST00000609613 938 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 MIR7106-201ENST00000612419 65 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX4Q33E94 AC092608.2-201ENST00000624427 218 ntBASIC2.21□□□□□ -2.06
RFX4Q33E94 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFX4Q33E94 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFX4Q33E94 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFX4Q33E94 AL137003.2-201ENST00000606924 2538 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX4Q33E94 RNU6-809P-201ENST00000384461 107 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 MIR34A-201ENST00000385130 110 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL139039.1-201ENST00000401900 692 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFX4Q33E94 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
RFX4Q33E94 RPS27AP14-201ENST00000422868 454 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC019097.1-201ENST00000424783 735 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AC244035.1-201ENST00000430042 390 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 FCF1P1-201ENST00000432690 571 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX4Q33E94 TIMM9P1-201ENST00000436122 256 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 RPS15AP27-201ENST00000449183 343 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX4Q33E94 RNU7-23P-201ENST00000459465 62 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 MRPL42P6-201ENST00000486397 371 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC138853.1-201ENST00000503549 823 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX4Q33E94 RNU6-1003P-201ENST00000517099 105 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 DEFB108A-201ENST00000530110 222 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 LRRC34P1-201ENST00000542742 915 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 EIF4BP1-201ENST00000554881 351 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
RFX4Q33E94 AC091489.2-201ENST00000566263 604 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AC011471.1-201ENST00000585766 187 ntBASIC2.2□□□□□ -2.06
RFX4Q33E94 AL033523.1-201ENST00000605153 153 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms