Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Y_RNA.46-201ENST00000362695 102 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 RNU6-853P-201ENST00000364306 107 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 Y_RNA.359-201ENST00000365498 102 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.43□□□□□ -2.02
CKAP4Q07065 Y_RNA.505-201ENST00000384489 102 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 RNU6-297P-201ENST00000384636 107 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 RPS20P2-201ENST00000402520 389 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.43□□□□□ -2.02
CKAP4Q07065 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AL022238.1-201ENST00000442557 355 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.43□□□□□ -2.02
CKAP4Q07065 Z82190.1-201ENST00000454534 490 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.43□□□□□ -2.02
CKAP4Q07065 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.43□□□□□ -2.02
CKAP4Q07065 TPT1P7-201ENST00000458300 517 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC021382.1-201ENST00000483523 359 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 LARP1BP2-201ENST00000486594 519 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC112204.1-201ENST00000502591 103 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 RPL37P25-201ENST00000507308 276 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AC006390.1-201ENST00000508068 283 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 CDC42P4-201ENST00000510507 563 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC026436.1-201ENST00000510537 270 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AF131216.2-201ENST00000512316 564 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.43□□□□□ -2.02
CKAP4Q07065 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CKAP4Q07065 OR4P1P-201ENST00000530808 1136 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.43□□□□□ -2.02
CKAP4Q07065 ZNF519P3-201ENST00000557158 1032 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.43□□□□□ -2.02
CKAP4Q07065 AC087683.1-201ENST00000591187 441 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC078795.2-201ENST00000602835 1252 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC079089.3-201ENST00000603094 673 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC013562.2-201ENST00000611632 603 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC002550.2-201ENST00000621246 394 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 AC244100.1-202ENST00000621554 382 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 MIR6766-201ENST00000622641 72 ntBASIC2.43□□□□□ -2.02
CKAP4Q07065 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.43□□□□□ -2.02
CKAP4Q07065 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
CKAP4Q07065 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC009902.3-201ENST00000606235 2172 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CKAP4Q07065 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKAP4Q07065 RNU6-97P-201ENST00000363387 104 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CKAP4Q07065 SNORA40.3-201ENST00000390964 122 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AL359704.1-201ENST00000411586 781 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC078974.1-201ENST00000411597 223 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC092427.1-202ENST00000430569 476 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 USP9YP14-201ENST00000430663 563 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.42□□□□□ -2.02
CKAP4Q07065 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.42□□□□□ -2.02
CKAP4Q07065 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.42□□□□□ -2.02
CKAP4Q07065 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CKAP4Q07065 AL033528.1-201ENST00000453780 140 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AP1S2P1-201ENST00000457344 379 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 FTH1P2-201ENST00000466086 412 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC017037.2-201ENST00000513850 890 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AP003033.1-201ENST00000527244 415 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 OR4R1P-201ENST00000529879 463 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.42□□□□□ -2.02
CKAP4Q07065 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 MIR4528-201ENST00000577763 90 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC009977.1-201ENST00000586015 570 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.42□□□□□ -2.02
CKAP4Q07065 BNIP3P8-201ENST00000597863 560 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC012669.1-201ENST00000603209 283 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC055876.5-201ENST00000605667 259 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.42□□□□□ -2.02
CKAP4Q07065 AC108479.2-201ENST00000617314 601 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC012150.2-201ENST00000621300 544 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AL356585.4-201ENST00000623078 1229 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 AC068880.5-201ENST00000624331 290 ntBASIC2.42□□□□□ -2.02
CKAP4Q07065 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
CKAP4Q07065 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.42□□□□□ -2.02
CKAP4Q07065 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CKAP4Q07065 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CKAP4Q07065 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CKAP4Q07065 SNORA71.3-201ENST00000362582 128 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.41□□□□□ -2.02
CKAP4Q07065 RNU6-301P-201ENST00000384277 107 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 U3.20-201ENST00000390909 217 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 USP9YP13-201ENST00000417797 480 ntBASIC2.41□□□□□ -2.02
CKAP4Q07065 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.41□□□□□ -2.02
CKAP4Q07065 AL353777.1-201ENST00000425552 326 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms