Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SNORD121B-201ENST00000458838 81 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 UBL5P3-201ENST00000475112 231 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC068587.2-201ENST00000478386 781 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 RPL21P99-201ENST00000480369 423 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.59□□□□□ -2.15
HOXC5Q00444 HMGB1P28-201ENST00000507778 552 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC107393.1-201ENST00000512403 346 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXC5Q00444 AC027338.1-201ENST00000514840 825 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 RNA5SP290-201ENST00000517133 127 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXC5Q00444 SLC2A13P1-201ENST00000531560 322 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC007151.1-201ENST00000572774 483 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC105245.1-201ENST00000581934 244 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXC5Q00444 AC005261.5-201ENST00000596280 355 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXC5Q00444 AL391813.1-201ENST00000603098 260 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC004805.2-201ENST00000605382 482 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC069294.1-201ENST00000608397 350 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 PISRT1-201ENST00000626175 531 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 AC116618.1-201ENST00000634617 774 ntBASIC1.59□□□□□ -2.15
HOXC5Q00444 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HOXC5Q00444 ZNF355P-201ENST00000427301 3216 ntBASIC1.59□□□□□ -2.16
HOXC5Q00444 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HOXC5Q00444 AC011477.1-204ENST00000623416 1325 ntBASIC1.59□□□□□ -2.16
HOXC5Q00444 CDR1-202ENST00000625883 1485 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC110491.1-201ENST00000562191 2010 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.58□□□□□ -2.16
HOXC5Q00444 RNU6-97P-201ENST00000363387 104 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 RNU6-114P-201ENST00000384704 105 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 MIR583-201ENST00000384846 75 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 MIR23A-201ENST00000385245 73 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AL079342.2-201ENST00000403367 482 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 RPL7P27-201ENST00000403775 720 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.58□□□□□ -2.16
HOXC5Q00444 RPL31P63-201ENST00000422565 375 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 MICF-203ENST00000432679 129 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 SNRPEP9-201ENST00000436794 238 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 IFNA20P-201ENST00000436840 528 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC004383.1-201ENST00000438135 289 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.58□□□□□ -2.16
HOXC5Q00444 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.58□□□□□ -2.16
HOXC5Q00444 RNU7-136P-201ENST00000458819 69 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 TRBV1-201ENST00000476502 284 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HOXC5Q00444 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC5Q00444 MTND4P2-201ENST00000507767 1203 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC5Q00444 AK6P1-201ENST00000540219 478 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC007375.1-201ENST00000554513 578 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 HIGD1AP17-201ENST00000554576 276 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC5Q00444 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 VN1R87P-201ENST00000596706 487 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC107075.1-201ENST00000613695 314 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AP001486.3-201ENST00000615334 372 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.58□□□□□ -2.16
HOXC5Q00444 AC012150.2-201ENST00000621300 544 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 AP002791.1-201ENST00000623291 381 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 MIR3199-2-201ENST00000636243 86 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HOXC5Q00444 AC103710.2-202ENST00000641454 2853 ntBASIC1.58□□□□□ -2.16
HOXC5Q00444 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 RNU6-1207P-201ENST00000384343 107 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HOXC5Q00444 RNU6-952P-201ENST00000391164 108 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 RN7SKP158-201ENST00000410453 326 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 TPMTP3-201ENST00000411928 735 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 USP9YP19-201ENST00000412165 485 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HOXC5Q00444 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 MTCYBP38-201ENST00000417160 1123 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 USP9YP13-201ENST00000417797 480 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXC5Q00444 FABP5P14-201ENST00000437273 393 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXC5Q00444 CECR9-201ENST00000453421 199 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.57□□□□□ -2.16
HOXC5Q00444 AC055731.1-201ENST00000474387 401 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AC092902.1-201ENST00000486999 259 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 HMGB1P36-201ENST00000487709 576 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AL160314.1-201ENST00000490836 438 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXC5Q00444 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.57□□□□□ -2.16
HOXC5Q00444 AL133241.1-201ENST00000556832 487 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HOXC5Q00444 MIR4765-201ENST00000585007 77 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 AL627230.6-201ENST00000611129 280 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXC5Q00444 AC019226.1-201ENST00000625666 515 ntBASIC1.57□□□□□ -2.16
HOXC5Q00444 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
HOXC5Q00444 AL390862.1-201ENST00000635467 1469 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 RNU6-1122P-201ENST00000384449 107 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 TXNP7-201ENST00000406296 293 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 RNU6-516P-201ENST00000411381 104 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 PGBD4P6-201ENST00000421501 610 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms