Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC104685.1-201ENST00000502445 371 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC112518.2-201ENST00000508565 425 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.1□□□□□ -2.23
ABCA4P78363 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.1□□□□□ -2.23
ABCA4P78363 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.1□□□□□ -2.23
ABCA4P78363 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.1□□□□□ -2.23
ABCA4P78363 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.1□□□□□ -2.23
ABCA4P78363 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.1□□□□□ -2.23
ABCA4P78363 AC090897.2-201ENST00000581715 130 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AL355297.2-201ENST00000604792 129 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 SNORD14A-201ENST00000606526 91 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.1□□□□□ -2.23
ABCA4P78363 AP003400.5-201ENST00000624827 617 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
ABCA4P78363 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.1□□□□□ -2.23
ABCA4P78363 MTND5P10-201ENST00000603719 1809 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 RNU6-152P-201ENST00000384037 107 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.1□□□□□ -2.23
ABCA4P78363 RFC5P1-201ENST00000454419 874 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 RNA5SP233-201ENST00000459153 113 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.1□□□□□ -2.23
ABCA4P78363 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.1□□□□□ -2.23
ABCA4P78363 AL133241.1-201ENST00000556832 487 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC096720.1-201ENST00000604441 183 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC106052.1-201ENST00000608029 497 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AL161423.1-201ENST00000613700 262 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 AC092608.3-201ENST00000625017 386 ntBASIC1.1□□□□□ -2.23
ABCA4P78363 ENSAP3-201ENST00000312710 333 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 USP9YP33-201ENST00000412220 421 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AL590383.1-201ENST00000428602 75 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 USP9YP35-201ENST00000435696 412 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.09□□□□□ -2.23
ABCA4P78363 Z82210.1-201ENST00000440037 231 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 ANKRD26P4-201ENST00000455755 950 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 CABYRP1-201ENST00000465493 1045 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC147055.4-201ENST00000504399 745 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 SNORD19.2-201ENST00000516978 73 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC004217.3-201ENST00000551552 878 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 MTCYBP27-201ENST00000555160 670 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AL031274.2-201ENST00000599419 203 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC021851.1-201ENST00000608537 1082 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC009090.3-201ENST00000616553 565 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 AC073308.1-201ENST00000623696 305 ntBASIC1.09□□□□□ -2.23
ABCA4P78363 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ABCA4P78363 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA4P78363 MIR7-1-201ENST00000384871 110 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AL033519.2-201ENST00000403958 392 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 RNU2-43P-201ENST00000410306 190 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA4P78363 SNORD56-201ENST00000413522 71 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA4P78363 MTND2P29-201ENST00000438595 412 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 SDCBPP1-201ENST00000440192 890 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA4P78363 RPS27P23-201ENST00000487608 251 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
ABCA4P78363 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.09□□□□□ -2.24
ABCA4P78363 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA4P78363 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA4P78363 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.09□□□□□ -2.24
ABCA4P78363 AC090888.1-201ENST00000561335 1141 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AC016542.1-201ENST00000608259 493 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AP003400.6-201ENST00000624698 740 ntBASIC1.09□□□□□ -2.24
ABCA4P78363 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
ABCA4P78363 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ABCA4P78363 SNORA18.2-201ENST00000383865 132 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 RNU6-921P-201ENST00000384361 107 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 MIR625-201ENST00000385047 85 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 LSM6P2-201ENST00000552208 177 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 MIR3198-2-201ENST00000577868 80 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 AC015688.2-201ENST00000584523 262 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 AC012669.1-201ENST00000603209 283 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA4P78363 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA4P78363 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
ABCA4P78363 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
ABCA4P78363 RNU6-891P-201ENST00000384280 111 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 MIR649-201ENST00000384843 97 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 LINC01347-201ENST00000417964 355 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 AIMP1P2-201ENST00000425294 312 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.08□□□□□ -2.24
ABCA4P78363 MTND4LP10-201ENST00000435146 291 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 AC093155.1-201ENST00000440164 826 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 ATG12P2-201ENST00000456830 416 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 snoU109.4-201ENST00000458953 143 ntBASIC1.08□□□□□ -2.24
ABCA4P78363 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ABCA4P78363 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
ABCA4P78363 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
ABCA4P78363 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms