Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.91□□□□□ -2.26
RPS28P62857 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPS28P62857 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
RPS28P62857 RNU1-13P-201ENST00000384499 162 ntBASIC0.91□□□□□ -2.26
RPS28P62857 SNORD65C-201ENST00000390962 71 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AL121882.1-201ENST00000422893 417 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AL139421.1-201ENST00000423010 169 ntBASIC0.91□□□□□ -2.26
RPS28P62857 RPL36AP53-201ENST00000432891 316 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.91□□□□□ -2.26
RPS28P62857 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPS28P62857 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.91□□□□□ -2.26
RPS28P62857 AL109933.2-201ENST00000452651 260 ntBASIC0.91□□□□□ -2.26
RPS28P62857 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.91□□□□□ -2.26
RPS28P62857 SNORD121B-201ENST00000458838 81 ntBASIC0.91□□□□□ -2.26
RPS28P62857 RPL37P6-201ENST00000460682 294 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.91□□□□□ -2.26
RPS28P62857 AC026427.2-201ENST00000506228 536 ntBASIC0.91□□□□□ -2.26
RPS28P62857 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC0.91□□□□□ -2.26
RPS28P62857 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RPS28P62857 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.91□□□□□ -2.26
RPS28P62857 AC022861.1-201ENST00000522981 663 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AP003122.4-201ENST00000530980 758 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AC005668.1-201ENST00000571142 476 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AC097468.3-201ENST00000607956 456 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AC211433.2-201ENST00000608433 387 ntBASIC0.91□□□□□ -2.26
RPS28P62857 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC0.91□□□□□ -2.26
RPS28P62857 MIR7703-201ENST00000620784 77 ntBASIC0.91□□□□□ -2.26
RPS28P62857 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.91□□□□□ -2.26
RPS28P62857 AC012618.3-205ENST00000637896 1496 ntBASIC0.91□□□□□ -2.26
RPS28P62857 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
RPS28P62857 MFSD8-213ENST00000641134 1327 ntBASIC0.9□□□□□ -2.26
RPS28P62857 AC104454.1-201ENST00000421341 1401 ntBASIC0.9□□□□□ -2.26
RPS28P62857 CBX3P1-201ENST00000325243 554 ntBASIC0.9□□□□□ -2.27
RPS28P62857 RNU6-28P-201ENST00000362378 107 ntBASIC0.9□□□□□ -2.27
RPS28P62857 RNU6-271P-201ENST00000363858 105 ntBASIC0.9□□□□□ -2.27
RPS28P62857 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
RPS28P62857 SNORA5A-201ENST00000384111 134 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AL133475.1-201ENST00000404414 305 ntBASIC0.9□□□□□ -2.27
RPS28P62857 NCOR1P3-201ENST00000420479 303 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RPS28P62857 AC245028.1-201ENST00000423259 256 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.9□□□□□ -2.27
RPS28P62857 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS28P62857 AC087499.2-201ENST00000432861 149 ntBASIC0.9□□□□□ -2.27
RPS28P62857 DUXAP8-207ENST00000456786 622 ntBASIC0.9□□□□□ -2.27
RPS28P62857 PRELID3BP1-201ENST00000457142 540 ntBASIC0.9□□□□□ -2.27
RPS28P62857 snoU13.8-201ENST00000458890 104 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS28P62857 AC007458.1-201ENST00000542812 373 ntBASIC0.9□□□□□ -2.27
RPS28P62857 LINC00557-201ENST00000563184 1279 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS28P62857 MIR5680-201ENST00000577577 84 ntBASIC0.9□□□□□ -2.27
RPS28P62857 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC0.9□□□□□ -2.27
RPS28P62857 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.9□□□□□ -2.27
RPS28P62857 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
RPS28P62857 AL034408.1-202ENST00000636088 415 ntBASIC0.9□□□□□ -2.27
RPS28P62857 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS28P62857 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.89□□□□□ -2.27
RPS28P62857 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPS28P62857 RNU6-1066P-201ENST00000363573 105 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPS28P62857 SNORA48.1-201ENST00000390879 135 ntBASIC0.89□□□□□ -2.27
RPS28P62857 RNA5SP100-201ENST00000410903 110 ntBASIC0.89□□□□□ -2.27
RPS28P62857 RNA5SP59-201ENST00000410922 110 ntBASIC0.89□□□□□ -2.27
RPS28P62857 RPL23AP39-201ENST00000415533 405 ntBASIC0.89□□□□□ -2.27
RPS28P62857 USP9YP26-201ENST00000421008 661 ntBASIC0.89□□□□□ -2.27
RPS28P62857 USP9YP18-201ENST00000425912 695 ntBASIC0.89□□□□□ -2.27
RPS28P62857 TRIM60P9Y-201ENST00000438459 816 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS28P62857 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RPS28P62857 USP9YP17-201ENST00000444617 696 ntBASIC0.89□□□□□ -2.27
RPS28P62857 TRIM60P11Y-201ENST00000445313 801 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS28P62857 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.89□□□□□ -2.27
RPS28P62857 RPS26P55-201ENST00000471178 356 ntBASIC0.89□□□□□ -2.27
RPS28P62857 MTAPP1-201ENST00000489154 819 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS28P62857 PTP4A1P4-201ENST00000512479 322 ntBASIC0.89□□□□□ -2.27
RPS28P62857 MTND5P13-201ENST00000513046 1079 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC008885.1-201ENST00000514930 301 ntBASIC0.89□□□□□ -2.27
RPS28P62857 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.89□□□□□ -2.27
RPS28P62857 ACA59.2-201ENST00000517061 156 ntBASIC0.89□□□□□ -2.27
RPS28P62857 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
RPS28P62857 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS28P62857 AC084851.1-201ENST00000529105 249 ntBASIC0.89□□□□□ -2.27
RPS28P62857 CCNG2P1-201ENST00000549521 1000 ntBASIC0.89□□□□□ -2.27
RPS28P62857 RPL30P11-203ENST00000598995 310 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC091057.3-201ENST00000602684 733 ntBASIC0.89□□□□□ -2.27
RPS28P62857 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPS28P62857 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC006338.2-201ENST00000616864 791 ntBASIC0.89□□□□□ -2.27
RPS28P62857 MIR8063-201ENST00000621930 81 ntBASIC0.89□□□□□ -2.27
RPS28P62857 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.89□□□□□ -2.27
RPS28P62857 AC138627.2-201ENST00000624202 601 ntBASIC0.89□□□□□ -2.27
RPS28P62857 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPS28P62857 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS28P62857 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
RPS28P62857 OR5J1P-201ENST00000313544 939 ntBASIC0.88□□□□□ -2.27
RPS28P62857 SNORA63.1-201ENST00000362493 131 ntBASIC0.88□□□□□ -2.27
RPS28P62857 RNA5SP479-201ENST00000364858 117 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms