Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.33□□□□□ -1.72
HERVK_113P62684 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
HERVK_113P62684 UBE3AP2-201ENST00000429033 2259 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERVK_113P62684 Y_RNA.339-201ENST00000365325 102 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 SNORD116-29-201ENST00000384516 83 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 SNORD70.1-201ENST00000391007 85 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 CISD1P1-201ENST00000393907 327 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 MTCYBP4-201ENST00000401524 249 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AL139039.1-201ENST00000401900 692 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AL583834.1-201ENST00000406943 343 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 MIR548K-201ENST00000408406 116 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 RNU6-370P-201ENST00000411008 104 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 PPP1R11P2-201ENST00000423543 382 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.33□□□□□ -1.72
HERVK_113P62684 AC104058.1-201ENST00000448028 297 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 SNORD105B-201ENST00000458770 79 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.33□□□□□ -1.72
HERVK_113P62684 AP006587.4-201ENST00000526053 529 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AP005639.2-201ENST00000527592 928 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.33□□□□□ -1.72
HERVK_113P62684 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.33□□□□□ -1.72
HERVK_113P62684 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.33□□□□□ -1.72
HERVK_113P62684 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.33□□□□□ -1.72
HERVK_113P62684 MIR3171-201ENST00000584270 74 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 XIAPP1-201ENST00000603162 600 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 DPPA3P3-201ENST00000603842 430 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 AL162730.1-201ENST00000605734 292 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.33□□□□□ -1.72
HERVK_113P62684 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.33□□□□□ -1.72
HERVK_113P62684 AL137003.2-201ENST00000606924 2538 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERVK_113P62684 AC007390.2-201ENST00000606229 3803 ntBASIC4.33□□□□□ -1.72
HERVK_113P62684 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
HERVK_113P62684 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERVK_113P62684 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 IPO8P1-201ENST00000455509 3109 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 MFSD8-236ENST00000641509 4050 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 Y_RNA.128-201ENST00000363391 112 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.32□□□□□ -1.72
HERVK_113P62684 RNU6-882P-201ENST00000391025 103 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 RNY4P36-201ENST00000391116 96 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 BX682237.1-201ENST00000415016 335 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 AC092809.3-201ENST00000415453 231 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.32□□□□□ -1.72
HERVK_113P62684 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.32□□□□□ -1.72
HERVK_113P62684 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.32□□□□□ -1.72
HERVK_113P62684 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.32□□□□□ -1.72
HERVK_113P62684 AP001086.1-201ENST00000494882 321 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.32□□□□□ -1.72
HERVK_113P62684 RAC1P2-201ENST00000511164 579 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 AC135001.1-201ENST00000544546 283 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HERVK_113P62684 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.32□□□□□ -1.72
HERVK_113P62684 MIR3672-201ENST00000584290 82 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 HMGN2P28-201ENST00000606102 262 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 AC009570.1-201ENST00000609599 745 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 U2.17-201ENST00000611454 95 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.32□□□□□ -1.72
HERVK_113P62684 SDR42E1P2-201ENST00000614861 481 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 AL049781.1-201ENST00000623195 3585 ntBASIC4.32□□□□□ -1.72
HERVK_113P62684 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
HERVK_113P62684 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HERVK_113P62684 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HERVK_113P62684 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 RNU6-254P-201ENST00000363377 107 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 RNU6-288P-201ENST00000363690 104 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 Y_RNA.216-201ENST00000364205 93 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 SNORA4.3-201ENST00000365564 137 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 MIR490-201ENST00000384865 128 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 MIR559-201ENST00000385188 96 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 SNORA75.4-201ENST00000391278 119 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 CYCSP4-201ENST00000429682 331 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC073063.1-201ENST00000434352 607 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.31□□□□□ -1.72
HERVK_113P62684 SNORA71B-202ENST00000439232 272 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.31□□□□□ -1.72
HERVK_113P62684 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HERVK_113P62684 DYNLL1P5-201ENST00000467158 270 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 RPS27P27-201ENST00000498779 255 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.31□□□□□ -1.72
HERVK_113P62684 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.31□□□□□ -1.72
HERVK_113P62684 AC005741.1-201ENST00000511094 432 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.31□□□□□ -1.72
HERVK_113P62684 RNU6-1045P-201ENST00000516321 107 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 RNU6-677P-201ENST00000516914 101 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 RNA5SP454-201ENST00000517231 127 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 COPS8P3-201ENST00000526024 482 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC007458.1-201ENST00000542812 373 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AL121603.1-201ENST00000553815 142 ntBASIC4.31□□□□□ -1.72
HERVK_113P62684 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms