Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 HMGB1P27-201ENST00000431429 603 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC080013.2-201ENST00000460866 323 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN18P56856 CKS1BP2-201ENST00000497342 240 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC112673.1-201ENST00000513168 575 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN18P56856 SNORD19.2-201ENST00000516978 73 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN18P56856 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN18P56856 AC010376.1-201ENST00000522101 334 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 MTCYBP20-201ENST00000524239 1129 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC006199.1-201ENST00000548728 219 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AL133241.1-201ENST00000556832 487 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.05□□□□□ -2.08
CLDN18P56856 AL138976.2-201ENST00000563989 694 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 RPP40P2-201ENST00000603596 712 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC098826.3-201ENST00000603823 466 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC107294.1-201ENST00000609524 467 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 DUSP12P1-201ENST00000612874 516 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AC109809.1-201ENST00000619665 545 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AP000676.3-201ENST00000623299 569 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 AL359854.1-201ENST00000614203 1594 ntBASIC2.05□□□□□ -2.08
CLDN18P56856 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDN18P56856 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.05□□□□□ -2.08
CLDN18P56856 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN18P56856 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN18P56856 RNU6-486P-201ENST00000363116 107 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 RNU6-777P-201ENST00000364265 104 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 SNORA40.4-201ENST00000390971 128 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 RN7SKP223-201ENST00000410582 62 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 MTATP6P30-201ENST00000443540 664 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AC124916.1-201ENST00000444020 547 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 HMGN2P10-201ENST00000448085 265 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 AL441985.1-201ENST00000457727 251 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.04□□□□□ -2.08
CLDN18P56856 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN18P56856 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 RNA5SP112-201ENST00000515937 99 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AL133153.1-201ENST00000557756 303 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC091057.3-201ENST00000602684 733 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 MTCYBP22-201ENST00000603788 447 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AL161798.1-201ENST00000604630 131 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN18P56856 AC007038.2-201ENST00000608095 740 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 uc_338.14-201ENST00000613162 166 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.04□□□□□ -2.08
CLDN18P56856 MIR6766-201ENST00000622641 72 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 AC097655.1-201ENST00000635075 318 ntBASIC2.04□□□□□ -2.08
CLDN18P56856 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN18P56856 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN18P56856 RNU6-512P-201ENST00000364438 103 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 RNU1-51P-201ENST00000365345 176 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AL021407.1-201ENST00000404531 386 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 RN7SKP192-201ENST00000411291 327 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.03□□□□□ -2.08
CLDN18P56856 AC083875.1-201ENST00000419509 405 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 OOSP1P1-201ENST00000423265 274 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC104651.1-201ENST00000427559 735 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AL139415.2-201ENST00000431968 163 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 RPS25P9-201ENST00000435591 252 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 RPL22P13-201ENST00000493291 347 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC104629.1-201ENST00000494226 508 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC079395.1-201ENST00000510981 262 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 RNU7-193P-201ENST00000516723 65 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 RNU6-467P-201ENST00000517027 110 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 AP000889.2-201ENST00000532684 490 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC009712.1-201ENST00000564938 316 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN18P56856 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN18P56856 AL138955.1-201ENST00000622881 1040 ntBASIC2.03□□□□□ -2.08
CLDN18P56856 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN18P56856 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN18P56856 UBE2L2-201ENST00000254302 429 ntBASIC2.02□□□□□ -2.09
CLDN18P56856 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
CLDN18P56856 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CLDN18P56856 U8.2-201ENST00000363156 134 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms