Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC078817.1-201ENST00000492623 435 ntBASIC4.38□□□□□ -1.71
MRE11P49959 RN7SL691P-201ENST00000494487 301 ntBASIC4.38□□□□□ -1.71
MRE11P49959 MTCO1P29-201ENST00000496868 288 ntBASIC4.38□□□□□ -1.71
MRE11P49959 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.38□□□□□ -1.71
MRE11P49959 RNU6-1170P-201ENST00000515974 106 ntBASIC4.38□□□□□ -1.71
MRE11P49959 RNU6-64P-201ENST00000517119 105 ntBASIC4.38□□□□□ -1.71
MRE11P49959 IGKV2D-19-201ENST00000523346 262 ntBASIC4.38□□□□□ -1.71
MRE11P49959 AP004242.1-201ENST00000533701 349 ntBASIC4.38□□□□□ -1.71
MRE11P49959 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.38□□□□□ -1.71
MRE11P49959 SETP7-201ENST00000552169 453 ntBASIC4.38□□□□□ -1.71
MRE11P49959 AL137849.1-201ENST00000604767 169 ntBASIC4.38□□□□□ -1.71
MRE11P49959 CTHRC1P1-201ENST00000605383 469 ntBASIC4.38□□□□□ -1.71
MRE11P49959 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MRE11P49959 AP001486.3-201ENST00000615334 372 ntBASIC4.38□□□□□ -1.71
MRE11P49959 uc_338.15-201ENST00000615470 191 ntBASIC4.38□□□□□ -1.71
MRE11P49959 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.38□□□□□ -1.71
MRE11P49959 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
MRE11P49959 PWAR6-201ENST00000552334 4618 ntBASIC4.38□□□□□ -1.71
MRE11P49959 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MRE11P49959 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
MRE11P49959 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.38□□□□□ -1.71
MRE11P49959 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 AL359893.1-201ENST00000447628 1580 ntBASIC4.37□□□□□ -1.71
MRE11P49959 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 AP002088.1-201ENST00000382740 395 ntBASIC4.37□□□□□ -1.71
MRE11P49959 SNORA5A-201ENST00000384111 134 ntBASIC4.37□□□□□ -1.71
MRE11P49959 Y_RNA.510-201ENST00000384511 114 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RNU6-738P-201ENST00000384531 106 ntBASIC4.37□□□□□ -1.71
MRE11P49959 Y_RNA.530-201ENST00000384587 101 ntBASIC4.37□□□□□ -1.71
MRE11P49959 MIR606-201ENST00000384851 96 ntBASIC4.37□□□□□ -1.71
MRE11P49959 SNORA75.4-201ENST00000391278 119 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RNU6-55P-201ENST00000411092 107 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RNU6-954P-201ENST00000411355 107 ntBASIC4.37□□□□□ -1.71
MRE11P49959 ARL5AP1-201ENST00000418991 388 ntBASIC4.37□□□□□ -1.71
MRE11P49959 PRPS1P1-201ENST00000445305 876 ntBASIC4.37□□□□□ -1.71
MRE11P49959 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.37□□□□□ -1.71
MRE11P49959 ANP32BP2-201ENST00000454525 545 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.37□□□□□ -1.71
MRE11P49959 Y_RNA.639-201ENST00000458981 102 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.37□□□□□ -1.71
MRE11P49959 RNU6-559P-201ENST00000516151 98 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RNU6-864P-201ENST00000516256 108 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RNA5SP49-201ENST00000516450 115 ntBASIC4.37□□□□□ -1.71
MRE11P49959 SNORA25.17-201ENST00000517184 124 ntBASIC4.37□□□□□ -1.71
MRE11P49959 IGKV2D-36-201ENST00000518643 226 ntBASIC4.37□□□□□ -1.71
MRE11P49959 FAM60DP-201ENST00000524174 632 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AP001804.3-201ENST00000525146 880 ntBASIC4.37□□□□□ -1.71
MRE11P49959 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.37□□□□□ -1.71
MRE11P49959 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.37□□□□□ -1.71
MRE11P49959 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.37□□□□□ -1.71
MRE11P49959 AC012182.1-201ENST00000570133 895 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
MRE11P49959 AL137843.1-201ENST00000605078 385 ntBASIC4.37□□□□□ -1.71
MRE11P49959 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 uc_338.34-201ENST00000617467 174 ntBASIC4.37□□□□□ -1.71
MRE11P49959 uc_338.11-201ENST00000619132 160 ntBASIC4.37□□□□□ -1.71
MRE11P49959 MIR7975-201ENST00000619350 68 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AL354798.1-201ENST00000622505 329 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AC011155.2-201ENST00000623202 216 ntBASIC4.37□□□□□ -1.71
MRE11P49959 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.37□□□□□ -1.71
MRE11P49959 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.37□□□□□ -1.71
MRE11P49959 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MRE11P49959 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.37□□□□□ -1.71
MRE11P49959 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.37□□□□□ -1.71
MRE11P49959 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRE11P49959 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MRE11P49959 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.36□□□□□ -1.71
MRE11P49959 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.36□□□□□ -1.71
MRE11P49959 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MRE11P49959 RNU6-179P-201ENST00000363350 107 ntBASIC4.36□□□□□ -1.71
MRE11P49959 Y_RNA.128-201ENST00000363391 112 ntBASIC4.36□□□□□ -1.71
MRE11P49959 SNORA4.3-201ENST00000365564 137 ntBASIC4.36□□□□□ -1.71
MRE11P49959 RNU5E-6P-201ENST00000365574 115 ntBASIC4.36□□□□□ -1.71
MRE11P49959 Y_RNA.414-201ENST00000384011 101 ntBASIC4.36□□□□□ -1.71
MRE11P49959 RNU6-474P-201ENST00000384243 107 ntBASIC4.36□□□□□ -1.71
MRE11P49959 RNU6-339P-201ENST00000384310 107 ntBASIC4.36□□□□□ -1.71
MRE11P49959 RNU6-1297P-201ENST00000384415 104 ntBASIC4.36□□□□□ -1.71
MRE11P49959 SNORD116-29-201ENST00000384516 83 ntBASIC4.36□□□□□ -1.71
MRE11P49959 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MRE11P49959 RNA5SP107-201ENST00000411358 122 ntBASIC4.36□□□□□ -1.71
MRE11P49959 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.36□□□□□ -1.71
MRE11P49959 MTCO2P27-201ENST00000420740 428 ntBASIC4.36□□□□□ -1.71
MRE11P49959 AL158071.1-201ENST00000430315 461 ntBASIC4.36□□□□□ -1.71
MRE11P49959 COX6B1P7-201ENST00000430845 235 ntBASIC4.36□□□□□ -1.71
MRE11P49959 HMGB3P11-201ENST00000440127 604 ntBASIC4.36□□□□□ -1.71
MRE11P49959 AC005094.1-201ENST00000440420 368 ntBASIC4.36□□□□□ -1.71
MRE11P49959 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.36□□□□□ -1.71
MRE11P49959 RANP8-201ENST00000444720 713 ntBASIC4.36□□□□□ -1.71
MRE11P49959 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.36□□□□□ -1.71
MRE11P49959 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.36□□□□□ -1.71
MRE11P49959 BX510359.1-201ENST00000456973 237 ntBASIC4.36□□□□□ -1.71
MRE11P49959 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms