Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 MIR3118-1-201ENST00000581787 76 ntBASIC2.56□□□□□ -2
ATRXP46100 DUXAP4-201ENST00000603046 613 ntBASIC2.56□□□□□ -2
ATRXP46100 AC007621.1-201ENST00000604544 437 ntBASIC2.56□□□□□ -2
ATRXP46100 AC004853.1-201ENST00000604902 698 ntBASIC2.56□□□□□ -2
ATRXP46100 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.56□□□□□ -2
ATRXP46100 MIR6864-201ENST00000617935 70 ntBASIC2.56□□□□□ -2
ATRXP46100 AC233309.1-201ENST00000619522 751 ntBASIC2.56□□□□□ -2
ATRXP46100 AL138713.1-201ENST00000624026 2130 ntBASIC2.55□□□□□ -2
ATRXP46100 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
ATRXP46100 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.55□□□□□ -2
ATRXP46100 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.55□□□□□ -2
ATRXP46100 SNORA51.2-201ENST00000364595 132 ntBASIC2.55□□□□□ -2
ATRXP46100 RNU6-1042P-201ENST00000384204 107 ntBASIC2.55□□□□□ -2
ATRXP46100 AL023807.1-201ENST00000407932 359 ntBASIC2.55□□□□□ -2
ATRXP46100 RNA5SP104-201ENST00000410989 118 ntBASIC2.55□□□□□ -2
ATRXP46100 HMGN1P14-201ENST00000412459 517 ntBASIC2.55□□□□□ -2
ATRXP46100 AC127526.1-201ENST00000417526 366 ntBASIC2.55□□□□□ -2
ATRXP46100 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.55□□□□□ -2
ATRXP46100 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.55□□□□□ -2
ATRXP46100 AC109583.1-201ENST00000432156 268 ntBASIC2.55□□□□□ -2
ATRXP46100 RPS26P56-201ENST00000444468 240 ntBASIC2.55□□□□□ -2
ATRXP46100 AL162389.1-201ENST00000449233 177 ntBASIC2.55□□□□□ -2
ATRXP46100 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.55□□□□□ -2
ATRXP46100 AC021205.2-201ENST00000480069 347 ntBASIC2.55□□□□□ -2
ATRXP46100 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.55□□□□□ -2
ATRXP46100 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.55□□□□□ -2
ATRXP46100 MYL12AP1-201ENST00000518490 515 ntBASIC2.55□□□□□ -2
ATRXP46100 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.55□□□□□ -2
ATRXP46100 AC109635.3-201ENST00000529536 185 ntBASIC2.55□□□□□ -2
ATRXP46100 CBX3P7-201ENST00000532876 502 ntBASIC2.55□□□□□ -2
ATRXP46100 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
ATRXP46100 AC107954.1-201ENST00000565906 727 ntBASIC2.55□□□□□ -2
ATRXP46100 MIR4716-201ENST00000579628 84 ntBASIC2.55□□□□□ -2
ATRXP46100 AC024619.4-201ENST00000580924 316 ntBASIC2.55□□□□□ -2
ATRXP46100 AC078899.5-201ENST00000612475 178 ntBASIC2.55□□□□□ -2
ATRXP46100 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ATRXP46100 AC004696.1-201ENST00000614345 607 ntBASIC2.55□□□□□ -2
ATRXP46100 AC000123.2-201ENST00000623124 461 ntBASIC2.55□□□□□ -2
ATRXP46100 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.55□□□□□ -2
ATRXP46100 AL159972.1-201ENST00000625150 448 ntBASIC2.55□□□□□ -2
ATRXP46100 AL157700.1-201ENST00000561973 1432 ntBASIC2.55□□□□□ -2
ATRXP46100 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ATRXP46100 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
ATRXP46100 Y_RNA.296-201ENST00000364930 108 ntBASIC2.54□□□□□ -2
ATRXP46100 AP002088.1-201ENST00000382740 395 ntBASIC2.54□□□□□ -2
ATRXP46100 RNU6-809P-201ENST00000384461 107 ntBASIC2.54□□□□□ -2
ATRXP46100 MT-TL1-201ENST00000386347 75 ntBASIC2.54□□□□□ -2
ATRXP46100 SNORA26.9-201ENST00000391322 122 ntBASIC2.54□□□□□ -2
ATRXP46100 RPS20P2-201ENST00000402520 389 ntBASIC2.54□□□□□ -2
ATRXP46100 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.54□□□□□ -2
ATRXP46100 RNU2-15P-201ENST00000410692 191 ntBASIC2.54□□□□□ -2
ATRXP46100 HMGB3P23-201ENST00000414981 585 ntBASIC2.54□□□□□ -2
ATRXP46100 NUP35P2-201ENST00000416748 943 ntBASIC2.54□□□□□ -2
ATRXP46100 MTCO2P19-201ENST00000427513 598 ntBASIC2.54□□□□□ -2
ATRXP46100 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.54□□□□□ -2
ATRXP46100 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
ATRXP46100 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.54□□□□□ -2
ATRXP46100 AC012170.1-201ENST00000495139 359 ntBASIC2.54□□□□□ -2
ATRXP46100 IGLVIV-53-201ENST00000520107 367 ntBASIC2.54□□□□□ -2
ATRXP46100 AC034268.2-201ENST00000571784 482 ntBASIC2.54□□□□□ -2
ATRXP46100 MAGOH2P-202ENST00000584384 429 ntBASIC2.54□□□□□ -2
ATRXP46100 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.54□□□□□ -2
ATRXP46100 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.54□□□□□ -2
ATRXP46100 AL355472.4-201ENST00000610233 626 ntBASIC2.54□□□□□ -2
ATRXP46100 U6atac.1-201ENST00000616025 117 ntBASIC2.54□□□□□ -2
ATRXP46100 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.54□□□□□ -2
ATRXP46100 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ATRXP46100 ELL2P4-201ENST00000446870 1376 ntBASIC2.54□□□□□ -2
ATRXP46100 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.54□□□□□ -2
ATRXP46100 AL450326.2-201ENST00000421913 1962 ntBASIC2.54□□□□□ -2
ATRXP46100 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATRXP46100 RNU6-249P-201ENST00000363016 102 ntBASIC2.54□□□□□ -2
ATRXP46100 RNU6-821P-201ENST00000390995 107 ntBASIC2.54□□□□□ -2
ATRXP46100 SNRPEP2-201ENST00000397592 279 ntBASIC2.54□□□□□ -2
ATRXP46100 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
ATRXP46100 RPL31P52-201ENST00000407532 367 ntBASIC2.54□□□□□ -2
ATRXP46100 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.54□□□□□ -2
ATRXP46100 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.54□□□□□ -2
ATRXP46100 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.54□□□□□ -2
ATRXP46100 USP9YP35-201ENST00000435696 412 ntBASIC2.54□□□□□ -2
ATRXP46100 MTND5P14-201ENST00000441481 1267 ntBASIC2.54□□□□□ -2
ATRXP46100 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.54□□□□□ -2
ATRXP46100 AC079781.2-201ENST00000446424 169 ntBASIC2.54□□□□□ -2
ATRXP46100 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.54□□□□□ -2
ATRXP46100 RPL23AP20-201ENST00000447965 421 ntBASIC2.54□□□□□ -2
ATRXP46100 MTND5P20-201ENST00000448677 143 ntBASIC2.54□□□□□ -2
ATRXP46100 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.54□□□□□ -2
ATRXP46100 RNU6-27P-201ENST00000516146 107 ntBASIC2.54□□□□□ -2
ATRXP46100 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.54□□□□□ -2
ATRXP46100 RN7SKP256-201ENST00000517201 314 ntBASIC2.54□□□□□ -2
ATRXP46100 PSMA3P-201ENST00000555485 635 ntBASIC2.54□□□□□ -2
ATRXP46100 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.54□□□□□ -2
ATRXP46100 SUB1P3-201ENST00000564581 315 ntBASIC2.54□□□□□ -2
ATRXP46100 AC025588.3-201ENST00000604182 274 ntBASIC2.54□□□□□ -2
ATRXP46100 AL136363.1-201ENST00000605349 337 ntBASIC2.54□□□□□ -2
ATRXP46100 AL161734.1-201ENST00000609720 557 ntBASIC2.54□□□□□ -2
ATRXP46100 AC103710.1-201ENST00000610003 901 ntBASIC2.54□□□□□ -2
ATRXP46100 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.54□□□□□ -2
ATRXP46100 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms