Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.54□□□□□ -2.32
HTTP42858 AC246680.2-201ENST00000422106 389 ntBASIC0.54□□□□□ -2.32
HTTP42858 AC069277.2-201ENST00000454211 432 ntBASIC0.54□□□□□ -2.32
HTTP42858 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.54□□□□□ -2.32
HTTP42858 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.54□□□□□ -2.32
HTTP42858 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.54□□□□□ -2.32
HTTP42858 AL161734.1-201ENST00000609720 557 ntBASIC0.54□□□□□ -2.32
HTTP42858 RNU6-72P-201ENST00000384285 79 ntBASIC0.53□□□□□ -2.32
HTTP42858 RPL23AP47-201ENST00000408017 460 ntBASIC0.53□□□□□ -2.32
HTTP42858 RAB9AP5-201ENST00000437794 597 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC020699.1-201ENST00000505161 445 ntBASIC0.53□□□□□ -2.32
HTTP42858 RNU6-964P-201ENST00000516524 69 ntBASIC0.53□□□□□ -2.32
HTTP42858 RNA5SP471-201ENST00000516971 106 ntBASIC0.53□□□□□ -2.32
HTTP42858 MIR4658-201ENST00000584344 65 ntBASIC0.53□□□□□ -2.32
HTTP42858 AL355297.2-201ENST00000604792 129 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC013470.4-201ENST00000619978 986 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC006065.5-201ENST00000623427 349 ntBASIC0.53□□□□□ -2.32
HTTP42858 AP003485.1-201ENST00000625093 753 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC110079.1-202ENST00000635213 138 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC110491.1-201ENST00000562191 2010 ntBASIC0.53□□□□□ -2.32
HTTP42858 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HTTP42858 AC100821.1-201ENST00000523153 2479 ntBASIC0.53□□□□□ -2.32
HTTP42858 SNORA9.1-201ENST00000362412 131 ntBASIC0.53□□□□□ -2.32
HTTP42858 SNRPEP7-201ENST00000438350 220 ntBASIC0.53□□□□□ -2.32
HTTP42858 MTND6P13-201ENST00000443510 523 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC010285.1-201ENST00000470580 392 ntBASIC0.53□□□□□ -2.32
HTTP42858 CDC42P4-201ENST00000510507 563 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC024060.1-201ENST00000607052 494 ntBASIC0.53□□□□□ -2.32
HTTP42858 AC090425.2-201ENST00000608818 501 ntBASIC0.53□□□□□ -2.32
HTTP42858 AL136313.1-201ENST00000624804 202 ntBASIC0.53□□□□□ -2.32
HTTP42858 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.53□□□□□ -2.33
HTTP42858 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.53□□□□□ -2.33
HTTP42858 KLRA1P-201ENST00000503499 986 ntBASIC0.53□□□□□ -2.33
HTTP42858 OR5H4P-201ENST00000510851 923 ntBASIC0.53□□□□□ -2.33
HTTP42858 RNU6-928P-201ENST00000516876 104 ntBASIC0.53□□□□□ -2.33
HTTP42858 RNA5SP108-201ENST00000605921 117 ntBASIC0.53□□□□□ -2.33
HTTP42858 DUSP12P1-201ENST00000612874 516 ntBASIC0.53□□□□□ -2.33
HTTP42858 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.53□□□□□ -2.33
HTTP42858 CCNB2P1-201ENST00000399411 1150 ntBASIC0.52□□□□□ -2.33
HTTP42858 AC073464.3-201ENST00000422564 712 ntBASIC0.52□□□□□ -2.33
HTTP42858 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.52□□□□□ -2.33
HTTP42858 AC004817.2-201ENST00000561794 651 ntBASIC0.52□□□□□ -2.33
HTTP42858 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
HTTP42858 MED14P1-201ENST00000430517 648 ntBASIC0.52□□□□□ -2.33
HTTP42858 AC093155.1-201ENST00000440164 826 ntBASIC0.52□□□□□ -2.33
HTTP42858 CASP3P1-201ENST00000446037 609 ntBASIC0.52□□□□□ -2.33
HTTP42858 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.52□□□□□ -2.33
HTTP42858 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.52□□□□□ -2.33
HTTP42858 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HTTP42858 AC006461.1-201ENST00000412637 326 ntBASIC0.51□□□□□ -2.33
HTTP42858 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.51□□□□□ -2.33
HTTP42858 AC004908.2-201ENST00000609090 574 ntBASIC0.51□□□□□ -2.33
HTTP42858 AP003122.6-201ENST00000623831 495 ntBASIC0.51□□□□□ -2.33
HTTP42858 CFTRP2-201ENST00000634304 199 ntBASIC0.51□□□□□ -2.33
HTTP42858 HMGN2P30-201ENST00000423237 256 ntBASIC0.51□□□□□ -2.33
HTTP42858 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.51□□□□□ -2.33
HTTP42858 MTND5P14-201ENST00000441481 1267 ntBASIC0.51□□□□□ -2.33
HTTP42858 AC009296.1-201ENST00000443146 155 ntBASIC0.51□□□□□ -2.33
HTTP42858 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.51□□□□□ -2.33
HTTP42858 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.51□□□□□ -2.33
HTTP42858 ELOCP5-201ENST00000604924 333 ntBASIC0.51□□□□□ -2.33
HTTP42858 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.51□□□□□ -2.33
HTTP42858 AC087359.1-201ENST00000508335 1740 ntBASIC0.51□□□□□ -2.33
HTTP42858 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HTTP42858 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.51□□□□□ -2.33
HTTP42858 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.51□□□□□ -2.33
HTTP42858 AC005332.10-201ENST00000612725 619 ntBASIC0.51□□□□□ -2.33
HTTP42858 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HTTP42858 AC008163.1-202ENST00000636004 2889 ntBASIC0.5□□□□□ -2.33
HTTP42858 RPL30P13-201ENST00000418873 348 ntBASIC0.5□□□□□ -2.33
HTTP42858 RPS6P14-201ENST00000425165 719 ntBASIC0.5□□□□□ -2.33
HTTP42858 AC022022.1-201ENST00000430304 178 ntBASIC0.5□□□□□ -2.33
HTTP42858 RPL39P29-201ENST00000447779 157 ntBASIC0.5□□□□□ -2.33
HTTP42858 OR6C72P-201ENST00000451403 892 ntBASIC0.5□□□□□ -2.33
HTTP42858 RPL30P5-201ENST00000494923 336 ntBASIC0.5□□□□□ -2.33
HTTP42858 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.5□□□□□ -2.33
HTTP42858 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.5□□□□□ -2.33
HTTP42858 NBEAP1-201ENST00000554452 979 ntBASIC0.5□□□□□ -2.33
HTTP42858 MIR4458-201ENST00000578872 75 ntBASIC0.5□□□□□ -2.33
HTTP42858 MIR515-2-201ENST00000384883 83 ntBASIC0.5□□□□□ -2.33
HTTP42858 MIR515-1-201ENST00000384884 83 ntBASIC0.5□□□□□ -2.33
HTTP42858 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HTTP42858 AL353706.1-201ENST00000436728 494 ntBASIC0.5□□□□□ -2.33
HTTP42858 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HTTP42858 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.5□□□□□ -2.33
HTTP42858 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HTTP42858 AC245128.3-201ENST00000594721 748 ntBASIC0.5□□□□□ -2.33
HTTP42858 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HTTP42858 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.5□□□□□ -2.33
HTTP42858 AC096632.1-201ENST00000427395 310 ntBASIC0.49□□□□□ -2.33
HTTP42858 ELOCP10-201ENST00000440624 327 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.49□□□□□ -2.33
HTTP42858 RN7SKP34-201ENST00000516142 244 ntBASIC0.49□□□□□ -2.33
HTTP42858 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
HTTP42858 Y_RNA.757-201ENST00000578934 114 ntBASIC0.49□□□□□ -2.33
HTTP42858 ELOCP34-201ENST00000604436 327 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC008945.2-201ENST00000606056 604 ntBASIC0.49□□□□□ -2.33
HTTP42858 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
HTTP42858 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.49□□□□□ -2.33
HTTP42858 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms