Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
HADHAP40939 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
HADHAP40939 AL109913.1-201ENST00000421173 514 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.19□□□□□ -1.9
HADHAP40939 ISCA1P6-201ENST00000427740 390 ntBASIC3.19□□□□□ -1.9
HADHAP40939 SAR1AP4-201ENST00000429225 591 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
HADHAP40939 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.19□□□□□ -1.9
HADHAP40939 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
HADHAP40939 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
HADHAP40939 CECR9-201ENST00000453421 199 ntBASIC3.19□□□□□ -1.9
HADHAP40939 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.19□□□□□ -1.9
HADHAP40939 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
HADHAP40939 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
HADHAP40939 RNU6-410P-201ENST00000517006 107 ntBASIC3.19□□□□□ -1.9
HADHAP40939 RNA5SP165-201ENST00000517142 115 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HADHAP40939 RN7SKP299-201ENST00000606679 301 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AC008498.1-201ENST00000613012 531 ntBASIC3.19□□□□□ -1.9
HADHAP40939 AC138932.5-201ENST00000617759 563 ntBASIC3.19□□□□□ -1.9
HADHAP40939 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
HADHAP40939 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.19□□□□□ -1.9
HADHAP40939 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
HADHAP40939 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
HADHAP40939 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HADHAP40939 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.18□□□□□ -1.9
HADHAP40939 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HADHAP40939 RNU6-884P-201ENST00000363889 107 ntBASIC3.18□□□□□ -1.9
HADHAP40939 RNU6-108P-201ENST00000365558 107 ntBASIC3.18□□□□□ -1.9
HADHAP40939 RNU6-39P-201ENST00000384344 107 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
HADHAP40939 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
HADHAP40939 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
HADHAP40939 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.18□□□□□ -1.9
HADHAP40939 MTCO2P34-201ENST00000421994 607 ntBASIC3.18□□□□□ -1.9
HADHAP40939 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.18□□□□□ -1.9
HADHAP40939 RPL36AP53-201ENST00000432891 316 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AL591212.2-201ENST00000433923 257 ntBASIC3.18□□□□□ -1.9
HADHAP40939 CYCSP32-201ENST00000440548 321 ntBASIC3.18□□□□□ -1.9
HADHAP40939 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
HADHAP40939 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 MTCO2P18-201ENST00000457151 658 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AC093899.1-201ENST00000457984 376 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AC233702.1-201ENST00000482905 502 ntBASIC3.18□□□□□ -1.9
HADHAP40939 RPS15AP34-201ENST00000487776 387 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
HADHAP40939 AC009901.1-201ENST00000506703 541 ntBASIC3.18□□□□□ -1.9
HADHAP40939 MTCO2P4-201ENST00000517968 247 ntBASIC3.18□□□□□ -1.9
HADHAP40939 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.18□□□□□ -1.9
HADHAP40939 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.18□□□□□ -1.9
HADHAP40939 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.18□□□□□ -1.9
HADHAP40939 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
HADHAP40939 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 AC010678.1-201ENST00000614118 713 ntBASIC3.18□□□□□ -1.9
HADHAP40939 AL359547.2-201ENST00000615810 418 ntBASIC3.18□□□□□ -1.9
HADHAP40939 MIR7112-201ENST00000616126 65 ntBASIC3.18□□□□□ -1.9
HADHAP40939 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
HADHAP40939 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
HADHAP40939 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
HADHAP40939 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HADHAP40939 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
HADHAP40939 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.17□□□□□ -1.9
HADHAP40939 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HADHAP40939 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HADHAP40939 RNU6-188P-201ENST00000364207 107 ntBASIC3.17□□□□□ -1.9
HADHAP40939 SNORA75-201ENST00000384158 137 ntBASIC3.17□□□□□ -1.9
HADHAP40939 RNA5SP354-201ENST00000391247 136 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
HADHAP40939 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 GPR143P-201ENST00000434155 205 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 MTCO1P19-201ENST00000443487 500 ntBASIC3.17□□□□□ -1.9
HADHAP40939 MTND1P29-201ENST00000448112 647 ntBASIC3.17□□□□□ -1.9
HADHAP40939 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 AC022364.2-201ENST00000457963 554 ntBASIC3.17□□□□□ -1.9
HADHAP40939 MRPS17P3-201ENST00000465453 385 ntBASIC3.17□□□□□ -1.9
HADHAP40939 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC090572.1-201ENST00000519251 160 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC022634.1-201ENST00000520765 532 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 AP002963.1-201ENST00000530590 184 ntBASIC3.17□□□□□ -1.9
HADHAP40939 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HADHAP40939 MIR3913-1-201ENST00000577744 102 ntBASIC3.17□□□□□ -1.9
HADHAP40939 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HADHAP40939 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
HADHAP40939 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.17□□□□□ -1.9
HADHAP40939 RSL24D1P11-201ENST00000591045 491 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms