Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL035423.1-201ENST00000420331 213 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A4P31645 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.85□□□□□ -1.79
SLC6A4P31645 RNU7-167P-201ENST00000459160 62 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 RPL7P49-201ENST00000471402 708 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A4P31645 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A4P31645 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
SLC6A4P31645 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A4P31645 AC020914.4-201ENST00000597690 277 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC022893.3-201ENST00000607665 437 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC6A4P31645 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC6A4P31645 AC034102.8-201ENST00000615146 484 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 C2orf27A-204ENST00000623058 969 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AC119674.1-207ENST00000641355 633 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC6A4P31645 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC6A4P31645 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SLC6A4P31645 MAPK10-372ENST00000641954 3413 ntBASIC3.85□□□□□ -1.79
SLC6A4P31645 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SLC6A4P31645 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC6A4P31645 RNA5SP119-201ENST00000362715 117 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 Y_RNA.67-201ENST00000362870 100 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 Y_RNA.315-201ENST00000365117 102 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 RNA5SP219-201ENST00000390940 113 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 SNORD70.1-201ENST00000391007 85 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 HLFP1-201ENST00000402375 499 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 RPS12P24-201ENST00000412619 387 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 BX682237.1-201ENST00000415016 335 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A4P31645 AC079780.1-201ENST00000428259 207 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AL356867.1-201ENST00000429623 299 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 GTF2IP13-201ENST00000438487 386 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AF228730.2-201ENST00000438784 848 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 HMGB3P22-202ENST00000451823 572 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 RPL23AP31-201ENST00000456160 467 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.84□□□□□ -1.79
SLC6A4P31645 AP001086.1-201ENST00000494882 321 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A4P31645 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A4P31645 AL359273.1-201ENST00000510918 627 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A4P31645 RANP9-201ENST00000519957 271 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A4P31645 SNRPGP16-201ENST00000533275 226 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AC008011.1-201ENST00000545989 227 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A4P31645 AL360157.1-201ENST00000565962 87 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AC005951.2-201ENST00000576282 495 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 DPPA3P3-201ENST00000603842 430 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AL161756.2-201ENST00000604597 246 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC6A4P31645 CTHRC1P1-201ENST00000605383 469 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
SLC6A4P31645 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SLC6A4P31645 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC6A4P31645 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.8
SLC6A4P31645 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A4P31645 AC116096.1-201ENST00000566804 2314 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RNA5SP167-201ENST00000365461 116 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RNA5SP424-201ENST00000390988 115 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A4P31645 AL139396.1-201ENST00000421137 167 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AL160275.3-201ENST00000423876 471 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RPL27AP8-201ENST00000424277 446 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RPL23AP69-201ENST00000431134 458 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A4P31645 RPS3AP12-201ENST00000443616 753 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 Y_RNA.635-201ENST00000459041 101 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RPL31P60-201ENST00000478450 367 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RPL21P93-201ENST00000480465 489 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RPL39P5-202ENST00000512505 151 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 IGKV2D-23-201ENST00000518179 286 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AC135001.1-201ENST00000544546 283 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AC090115.3-201ENST00000553218 849 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A4P31645 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A4P31645 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A4P31645 HMGB1P50-201ENST00000605814 607 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AC107294.1-201ENST00000609524 467 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 AL034408.1-202ENST00000636088 415 ntBASIC3.83□□□□□ -1.8
SLC6A4P31645 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A4P31645 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A4P31645 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A4P31645 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SLC6A4P31645 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms