Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR5583-1-201ENST00000580941 59 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 AC136601.2-201ENST00000604356 474 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.28□□□□□ -1.72
CNGA1P29973 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 uc_338.34-201ENST00000617467 174 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 AC027309.3-201ENST00000623419 351 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 MIR3651-201ENST00000630427 90 ntBASIC4.28□□□□□ -1.72
CNGA1P29973 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNGA1P29973 CUL1P1-201ENST00000509510 2425 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
CNGA1P29973 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNGA1P29973 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNGA1P29973 RNA5SP267-201ENST00000364893 126 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 RNU6-38P-201ENST00000384085 107 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 RNU6-1127P-201ENST00000384580 107 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CNGA1P29973 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNGA1P29973 AP000567.1-201ENST00000406413 156 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 RNU6-373P-201ENST00000411247 98 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 AL158156.1-201ENST00000422509 473 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 TMEM167AP1-201ENST00000423409 219 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AC097713.2-201ENST00000430199 356 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AL512844.2-201ENST00000433990 593 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 RNU6-333P-201ENST00000459117 107 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 TRBV1-201ENST00000476502 284 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 FCF1P3-201ENST00000496394 590 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 AC091885.1-201ENST00000506658 268 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CNGA1P29973 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.27□□□□□ -1.73
CNGA1P29973 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC006504.8-201ENST00000621046 635 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.27□□□□□ -1.73
CNGA1P29973 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.27□□□□□ -1.73
CNGA1P29973 AL512643.1-201ENST00000635735 524 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CNGA1P29973 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CNGA1P29973 CASC19-280ENST00000642102 1351 ntBASIC4.27□□□□□ -1.73
CNGA1P29973 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNGA1P29973 Y_RNA.231-201ENST00000364358 102 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 SNORA4.3-201ENST00000365564 137 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 RNY3P14-201ENST00000384309 102 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CNGA1P29973 ATP5A1P2-201ENST00000412323 255 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 BX323014.1-201ENST00000412876 237 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.26□□□□□ -1.73
CNGA1P29973 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 GPM6BP2-201ENST00000432046 144 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 GPM6BP1-201ENST00000446387 144 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 MTND4P18-201ENST00000447010 465 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 RNA5SP310-201ENST00000459084 116 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 RPL21P10-201ENST00000463521 490 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.26□□□□□ -1.73
CNGA1P29973 MTCYBP18-201ENST00000501056 747 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.26□□□□□ -1.73
CNGA1P29973 RNU6-143P-201ENST00000516942 93 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 RNU6-1315P-201ENST00000517187 99 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 RN7SKP57-201ENST00000517248 293 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 MTND4P7-201ENST00000523876 130 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AP003122.3-201ENST00000526316 255 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AC084851.1-201ENST00000529105 249 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AC007458.1-201ENST00000542812 373 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 AC012531.5-201ENST00000611375 151 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 AP003122.6-201ENST00000623831 495 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.26□□□□□ -1.73
CNGA1P29973 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.26□□□□□ -1.73
CNGA1P29973 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CNGA1P29973 AL359693.1-201ENST00000614959 2407 ntBASIC4.26□□□□□ -1.73
CNGA1P29973 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CNGA1P29973 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CNGA1P29973 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CNGA1P29973 UBE3AP2-201ENST00000429033 2259 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 RPS4XP5-202ENST00000449995 1334 ntBASIC4.25□□□□□ -1.73
CNGA1P29973 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CNGA1P29973 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms