Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 AL391261.4-201ENST00000616012 481 ntBASIC3.79□□□□□ -1.8
NR4A1P22736 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
NR4A1P22736 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 AL773545.4-201ENST00000637262 310 ntBASIC3.79□□□□□ -1.8
NR4A1P22736 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 AL513478.4-201ENST00000641636 310 ntBASIC3.79□□□□□ -1.8
NR4A1P22736 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NR4A1P22736 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR4A1P22736 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NR4A1P22736 EIF2AP4-201ENST00000424793 1781 ntBASIC3.79□□□□□ -1.8
NR4A1P22736 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.78□□□□□ -1.8
NR4A1P22736 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 AC126755.2-208ENST00000327792 462 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC138969.1-213ENST00000331436 462 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 MIR331-201ENST00000362302 94 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 SNORA23-201ENST00000365128 182 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 Y_RNA.428-201ENST00000384078 102 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 Y_RNA.556-201ENST00000384677 113 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 RN7SKP58-201ENST00000411010 305 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 Z99755.1-201ENST00000414048 380 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AL590632.1-201ENST00000424289 371 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 C4BPAP2-201ENST00000428434 478 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AL121871.1-201ENST00000443413 436 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 NDUFS5P3-201ENST00000450668 321 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC117503.1-201ENST00000472241 394 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 RPL31P60-201ENST00000478450 367 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.78□□□□□ -1.8
NR4A1P22736 SNORD116-26-201ENST00000516006 96 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 RNU6-1095P-201ENST00000516148 108 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 RNU6-390P-201ENST00000516259 103 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 Y_RNA.689-201ENST00000516589 107 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 RN7SKP234-201ENST00000517173 224 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC005899.2-201ENST00000584353 90 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC067852.3-201ENST00000589177 561 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC073539.2-201ENST00000597113 165 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC011944.2-201ENST00000624440 683 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.78□□□□□ -1.8
NR4A1P22736 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
NR4A1P22736 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR4A1P22736 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NR4A1P22736 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.78□□□□□ -1.81
NR4A1P22736 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR4A1P22736 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR4A1P22736 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR4A1P22736 RNU6-1155P-201ENST00000363554 107 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 Y_RNA.476-201ENST00000384347 108 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RNU6-95P-201ENST00000384697 107 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 Y_RNA.574-201ENST00000384766 95 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RNU6-817P-201ENST00000391083 104 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.77□□□□□ -1.81
NR4A1P22736 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.77□□□□□ -1.81
NR4A1P22736 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.77□□□□□ -1.81
NR4A1P22736 MRPS18BP2-201ENST00000434310 759 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.77□□□□□ -1.81
NR4A1P22736 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.77□□□□□ -1.81
NR4A1P22736 RNU6-953P-201ENST00000459154 107 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 U8.20-201ENST00000459445 131 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RPL37P6-201ENST00000460682 294 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RPL37P6-202ENST00000464216 403 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RPS23P7-201ENST00000466210 444 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AC103987.1-201ENST00000473394 348 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RPL21P103-201ENST00000479921 488 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AC096745.1-201ENST00000509945 370 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.77□□□□□ -1.81
NR4A1P22736 RN7SKP60-201ENST00000516985 239 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 RNU6-699P-201ENST00000517081 110 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 SNORD116.3-201ENST00000517176 78 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 Y_RNA.721-201ENST00000517207 102 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR4A1P22736 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.77□□□□□ -1.81
NR4A1P22736 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.77□□□□□ -1.81
NR4A1P22736 AL442067.1-201ENST00000613261 223 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AL021997.2-201ENST00000615674 271 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 MIR7702-201ENST00000621931 59 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 AC140479.6-201ENST00000633535 357 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.77□□□□□ -1.81
NR4A1P22736 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
NR4A1P22736 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR4A1P22736 AC005592.1-201ENST00000566527 1640 ntBASIC3.77□□□□□ -1.81
NR4A1P22736 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms