Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 Y_RNA.526-201ENST00000384572 110 ntBASIC5.25□□□□□ -1.57
RFX1P22670 MIR521-1-201ENST00000384902 87 ntBASIC5.25□□□□□ -1.57
RFX1P22670 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFX1P22670 RNU6-1197P-201ENST00000391183 107 ntBASIC5.25□□□□□ -1.57
RFX1P22670 RPS29P13-201ENST00000402041 169 ntBASIC5.25□□□□□ -1.57
RFX1P22670 PPIAP31-201ENST00000405422 495 ntBASIC5.25□□□□□ -1.57
RFX1P22670 RNU2-71P-201ENST00000411395 189 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AL358472.1-201ENST00000431295 329 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC073910.1-201ENST00000445047 438 ntBASIC5.25□□□□□ -1.57
RFX1P22670 OSTCP8-201ENST00000445117 448 ntBASIC5.25□□□□□ -1.57
RFX1P22670 HIGD1AP2-201ENST00000446367 280 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AL645939.1-201ENST00000453429 797 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC091153.1-201ENST00000466297 402 ntBASIC5.25□□□□□ -1.57
RFX1P22670 RN7SL558P-201ENST00000497468 299 ntBASIC5.25□□□□□ -1.57
RFX1P22670 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX1P22670 Y_RNA.668-201ENST00000516233 93 ntBASIC5.25□□□□□ -1.57
RFX1P22670 RNU6-911P-201ENST00000516523 104 ntBASIC5.25□□□□□ -1.57
RFX1P22670 RNA5SP468-201ENST00000516782 93 ntBASIC5.25□□□□□ -1.57
RFX1P22670 IGKV1-32-201ENST00000519290 311 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.25□□□□□ -1.57
RFX1P22670 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX1P22670 AC005476.1-201ENST00000554427 397 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AL049839.1-201ENST00000556151 657 ntBASIC5.25□□□□□ -1.57
RFX1P22670 HSPE1P5-201ENST00000561489 272 ntBASIC5.25□□□□□ -1.57
RFX1P22670 MIR5096-201ENST00000583713 70 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX1P22670 VN1R91P-201ENST00000594377 169 ntBASIC5.25□□□□□ -1.57
RFX1P22670 SRGNP1-201ENST00000603392 451 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC008962.1-201ENST00000605729 304 ntBASIC5.25□□□□□ -1.57
RFX1P22670 HMGB1P50-201ENST00000605814 607 ntBASIC5.25□□□□□ -1.57
RFX1P22670 AC020634.1-201ENST00000608701 549 ntBASIC5.25□□□□□ -1.57
RFX1P22670 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX1P22670 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX1P22670 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX1P22670 U4.7-201ENST00000638126 106 ntBASIC5.25□□□□□ -1.57
RFX1P22670 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX1P22670 MAPK10-320ENST00000641462 6696 ntBASIC5.25□□□□□ -1.57
RFX1P22670 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX1P22670 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX1P22670 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX1P22670 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX1P22670 MAPK10-286ENST00000641208 8747 ntBASIC5.24□□□□□ -1.57
RFX1P22670 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 RNY3P11-201ENST00000364153 102 ntBASIC5.24□□□□□ -1.57
RFX1P22670 Y_RNA.276-201ENST00000364732 109 ntBASIC5.24□□□□□ -1.57
RFX1P22670 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX1P22670 AL357515.1-201ENST00000402967 542 ntBASIC5.24□□□□□ -1.57
RFX1P22670 TBCAP2-201ENST00000416175 326 ntBASIC5.24□□□□□ -1.57
RFX1P22670 RPL21P2-201ENST00000440049 481 ntBASIC5.24□□□□□ -1.57
RFX1P22670 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX1P22670 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX1P22670 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX1P22670 NIP7P2-201ENST00000485801 544 ntBASIC5.24□□□□□ -1.57
RFX1P22670 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX1P22670 RNU6-513P-201ENST00000516104 104 ntBASIC5.24□□□□□ -1.57
RFX1P22670 RNU6-709P-201ENST00000517257 104 ntBASIC5.24□□□□□ -1.57
RFX1P22670 AC103996.1-201ENST00000555468 102 ntBASIC5.24□□□□□ -1.57
RFX1P22670 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX1P22670 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX1P22670 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.24□□□□□ -1.57
RFX1P22670 SCARNA4-202ENST00000625402 129 ntBASIC5.24□□□□□ -1.57
RFX1P22670 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 AC104260.2-201ENST00000623551 3497 ntBASIC5.24□□□□□ -1.57
RFX1P22670 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX1P22670 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX1P22670 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX1P22670 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX1P22670 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 RNU6-140P-201ENST00000384566 108 ntBASIC5.23□□□□□ -1.57
RFX1P22670 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 AL445433.1-201ENST00000457507 257 ntBASIC5.23□□□□□ -1.57
RFX1P22670 RNA5SP103-201ENST00000459503 118 ntBASIC5.23□□□□□ -1.57
RFX1P22670 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX1P22670 AK3P2-201ENST00000507976 429 ntBASIC5.23□□□□□ -1.57
RFX1P22670 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX1P22670 RNU6-377P-201ENST00000515965 102 ntBASIC5.23□□□□□ -1.57
RFX1P22670 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX1P22670 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 AC022882.1-201ENST00000532142 501 ntBASIC5.23□□□□□ -1.57
RFX1P22670 AC004584.2-201ENST00000570407 410 ntBASIC5.23□□□□□ -1.57
RFX1P22670 AC136624.4-201ENST00000573044 370 ntBASIC5.23□□□□□ -1.57
RFX1P22670 MIR4277-201ENST00000578298 84 ntBASIC5.23□□□□□ -1.57
RFX1P22670 AC006023.2-201ENST00000609916 167 ntBASIC5.23□□□□□ -1.57
RFX1P22670 AC062037.2-201ENST00000610137 73 ntBASIC5.23□□□□□ -1.57
RFX1P22670 OR56B2P-202ENST00000641377 2453 ntBASIC5.23□□□□□ -1.57
RFX1P22670 ZFRP1-201ENST00000457579 2970 ntBASIC5.23□□□□□ -1.57
RFX1P22670 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX1P22670 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RFX1P22670 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms