Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RAP1BP2-201ENST00000478270 544 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC092185.1-201ENST00000491371 97 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC109927.2-201ENST00000506416 303 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
CAPN3P20807 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC108078.2-201ENST00000510750 236 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CAPN3P20807 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AL157871.3-201ENST00000557231 293 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 AC012414.6-201ENST00000568241 401 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
CAPN3P20807 MIR1273C-201ENST00000578669 77 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC090578.1-201ENST00000604955 591 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 OR2AS2P-201ENST00000606902 342 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 AC072046.2-201ENST00000618366 268 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 Z69908.1-201ENST00000622603 247 ntBASIC3.23□□□□□ -1.89
CAPN3P20807 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CAPN3P20807 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.22□□□□□ -1.89
CAPN3P20807 Y_RNA.33-201ENST00000362591 102 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 UBA52P6-201ENST00000399822 382 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 C1DP2-201ENST00000418167 426 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.22□□□□□ -1.89
CAPN3P20807 RPL7P37-201ENST00000425095 738 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC005326.1-201ENST00000429197 123 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.22□□□□□ -1.89
CAPN3P20807 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.22□□□□□ -1.89
CAPN3P20807 HMGN2P10-201ENST00000448085 265 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.22□□□□□ -1.89
CAPN3P20807 AC115115.1-201ENST00000449927 248 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.22□□□□□ -1.89
CAPN3P20807 SNORA31.18-201ENST00000517043 134 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC068657.1-201ENST00000520807 306 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.22□□□□□ -1.89
CAPN3P20807 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
CAPN3P20807 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.22□□□□□ -1.89
CAPN3P20807 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.22□□□□□ -1.89
CAPN3P20807 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CAPN3P20807 AP000873.5-201ENST00000533906 236 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC021739.1-201ENST00000559631 174 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.22□□□□□ -1.89
CAPN3P20807 AL137843.1-201ENST00000605078 385 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 MIR98-201ENST00000606724 119 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
CAPN3P20807 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CAPN3P20807 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CAPN3P20807 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CAPN3P20807 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CAPN3P20807 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CAPN3P20807 OR5J1P-201ENST00000313544 939 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 RNU6-179P-201ENST00000363350 107 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 RNU6-1083P-201ENST00000384022 107 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.21□□□□□ -1.9
CAPN3P20807 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
CAPN3P20807 CALM2P2-201ENST00000428512 440 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 GPR143P-201ENST00000434155 205 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.21□□□□□ -1.9
CAPN3P20807 MTND2P4-201ENST00000445034 1004 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.21□□□□□ -1.9
CAPN3P20807 RPL31P3-201ENST00000458430 332 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 RPS3AP14-201ENST00000483907 780 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 COX6CP5-201ENST00000527162 228 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 GLYCAM1-201ENST00000546596 285 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CAPN3P20807 MIR3167-201ENST00000579623 85 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 AL451007.1-201ENST00000595491 289 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.21□□□□□ -1.9
CAPN3P20807 AC068790.2-201ENST00000602601 557 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AL158032.1-201ENST00000605401 106 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AC087752.4-201ENST00000605911 462 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 MIR15A-201ENST00000607334 83 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 AC012409.4-201ENST00000612923 249 ntBASIC3.21□□□□□ -1.9
CAPN3P20807 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CAPN3P20807 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
CAPN3P20807 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
CAPN3P20807 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN3P20807 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CAPN3P20807 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CAPN3P20807 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CAPN3P20807 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CAPN3P20807 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.2□□□□□ -1.9
CAPN3P20807 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CAPN3P20807 Y_RNA.77-201ENST00000362962 107 ntBASIC3.2□□□□□ -1.9
CAPN3P20807 SNORD56.5-201ENST00000364281 72 ntBASIC3.2□□□□□ -1.9
CAPN3P20807 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms