Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL391361.1-201ENST00000405580 489 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC011933.1-201ENST00000413334 321 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 AC007161.1-204ENST00000423039 460 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC008267.5-201ENST00000424928 265 ntBASIC4.18□□□□□ -1.74
ATF4P18848 RSL24D1P6-201ENST00000426934 401 ntBASIC4.18□□□□□ -1.74
ATF4P18848 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.18□□□□□ -1.74
ATF4P18848 AC005300.1-201ENST00000428401 373 ntBASIC4.18□□□□□ -1.74
ATF4P18848 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 CYCSP32-201ENST00000440548 321 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 RPS3AP46-201ENST00000448352 682 ntBASIC4.18□□□□□ -1.74
ATF4P18848 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
ATF4P18848 AC025445.1-201ENST00000502728 300 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC022447.4-201ENST00000504053 364 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.18□□□□□ -1.74
ATF4P18848 SCARNA20.4-201ENST00000516969 131 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.18□□□□□ -1.74
ATF4P18848 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.18□□□□□ -1.74
ATF4P18848 AC027544.3-201ENST00000535082 757 ntBASIC4.18□□□□□ -1.74
ATF4P18848 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 AL049872.1-201ENST00000556323 322 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 AC024581.2-201ENST00000619986 252 ntBASIC4.18□□□□□ -1.74
ATF4P18848 AC140113.4-201ENST00000622087 222 ntBASIC4.18□□□□□ -1.74
ATF4P18848 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.18□□□□□ -1.74
ATF4P18848 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATF4P18848 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ATF4P18848 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.18□□□□□ -1.74
ATF4P18848 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ATF4P18848 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 ZNF299P-201ENST00000406845 1804 ntBASIC4.17□□□□□ -1.74
ATF4P18848 Y_RNA.48-201ENST00000362710 103 ntBASIC4.17□□□□□ -1.74
ATF4P18848 Y_RNA.145-201ENST00000363527 102 ntBASIC4.17□□□□□ -1.74
ATF4P18848 RNU6-1032P-201ENST00000384100 107 ntBASIC4.17□□□□□ -1.74
ATF4P18848 RNU4-6P-201ENST00000410804 122 ntBASIC4.17□□□□□ -1.74
ATF4P18848 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.17□□□□□ -1.74
ATF4P18848 NUP35P1-201ENST00000422734 947 ntBASIC4.17□□□□□ -1.74
ATF4P18848 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.17□□□□□ -1.74
ATF4P18848 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.17□□□□□ -1.74
ATF4P18848 AL353997.1-201ENST00000432936 108 ntBASIC4.17□□□□□ -1.74
ATF4P18848 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.17□□□□□ -1.74
ATF4P18848 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 AL450023.1-201ENST00000450868 751 ntBASIC4.17□□□□□ -1.74
ATF4P18848 RNU7-23P-201ENST00000459465 62 ntBASIC4.17□□□□□ -1.74
ATF4P18848 MRPL42P6-201ENST00000486397 371 ntBASIC4.17□□□□□ -1.74
ATF4P18848 RN7SL629P-201ENST00000489622 285 ntBASIC4.17□□□□□ -1.74
ATF4P18848 RNU6-581P-201ENST00000516214 105 ntBASIC4.17□□□□□ -1.74
ATF4P18848 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.17□□□□□ -1.74
ATF4P18848 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.17□□□□□ -1.74
ATF4P18848 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.17□□□□□ -1.74
ATF4P18848 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.17□□□□□ -1.74
ATF4P18848 OR7E18P-201ENST00000592589 702 ntBASIC4.17□□□□□ -1.74
ATF4P18848 AL162730.1-201ENST00000605734 292 ntBASIC4.17□□□□□ -1.74
ATF4P18848 HMGB1P24-202ENST00000615653 685 ntBASIC4.17□□□□□ -1.74
ATF4P18848 AC109583.2-201ENST00000617367 129 ntBASIC4.17□□□□□ -1.74
ATF4P18848 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATF4P18848 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
ATF4P18848 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
ATF4P18848 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 AC007256.1-201ENST00000392253 2765 ntBASIC4.16□□□□□ -1.74
ATF4P18848 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
ATF4P18848 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.16□□□□□ -1.74
ATF4P18848 Y_RNA.148-201ENST00000363557 117 ntBASIC4.16□□□□□ -1.74
ATF4P18848 SNORA63C-201ENST00000364578 129 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RNU1-115P-201ENST00000365329 160 ntBASIC4.16□□□□□ -1.74
ATF4P18848 Y_RNA.364-201ENST00000365532 101 ntBASIC4.16□□□□□ -1.74
ATF4P18848 Y_RNA.577-201ENST00000384794 101 ntBASIC4.16□□□□□ -1.74
ATF4P18848 FTH1P15-201ENST00000406984 280 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RNA5SP39-201ENST00000411245 120 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AL714022.1-201ENST00000439897 151 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AC011753.3-201ENST00000443436 406 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RPL21P23-201ENST00000446654 460 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RPS23P6-201ENST00000466136 431 ntBASIC4.16□□□□□ -1.74
ATF4P18848 RN7SL812P-201ENST00000493791 279 ntBASIC4.16□□□□□ -1.74
ATF4P18848 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATF4P18848 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.16□□□□□ -1.74
ATF4P18848 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.16□□□□□ -1.74
ATF4P18848 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms