Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP000346.3-201ENST00000622821 210 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC091925.1-201ENST00000623204 462 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC140479.6-201ENST00000633535 357 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.18□□□□□ -1.74
COL6A2P12110 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 RNU6-1329P-201ENST00000365664 107 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 SNORA37-201ENST00000384504 129 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 MIR301A-201ENST00000385261 86 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 RNU2-3P-201ENST00000410144 191 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 RNA5SP306-201ENST00000411087 107 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC113618.1-201ENST00000416747 285 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.18□□□□□ -1.74
COL6A2P12110 UBE2D3P2-201ENST00000424409 445 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC011998.1-201ENST00000433403 117 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.18□□□□□ -1.74
COL6A2P12110 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.18□□□□□ -1.74
COL6A2P12110 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.18□□□□□ -1.74
COL6A2P12110 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.18□□□□□ -1.74
COL6A2P12110 RNU2-58P-201ENST00000516403 183 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 SCARNA15.2-201ENST00000516409 127 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 RNU6-1137P-201ENST00000517073 99 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.18□□□□□ -1.74
COL6A2P12110 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.18□□□□□ -1.74
COL6A2P12110 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.18□□□□□ -1.74
COL6A2P12110 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 AC008745.1-201ENST00000604064 271 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC106900.2-201ENST00000604994 317 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC005344.1-201ENST00000613391 459 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 AC092608.2-201ENST00000624427 218 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 MARK2P15-201ENST00000432204 2186 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 ZNF962P-201ENST00000443465 3140 ntBASIC4.18□□□□□ -1.74
COL6A2P12110 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL6A2P12110 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL6A2P12110 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
COL6A2P12110 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.18□□□□□ -1.74
COL6A2P12110 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.17□□□□□ -1.74
COL6A2P12110 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL6A2P12110 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL6A2P12110 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
COL6A2P12110 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL6A2P12110 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC138393.1-203ENST00000327086 343 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNU6-490P-201ENST00000362985 107 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNU6-1167P-201ENST00000363227 94 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 MIR1183-201ENST00000408856 89 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 CYCSP33-201ENST00000414485 327 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 EI24P1-201ENST00000416584 867 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 MCFD2P1-201ENST00000417812 300 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 ARL2BPP10-201ENST00000446487 531 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC010285.1-201ENST00000470580 392 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC103987.1-201ENST00000473394 348 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RPL7P42-201ENST00000481005 679 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 RNU6-470P-201ENST00000515954 104 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNA5SP309-201ENST00000516670 106 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNU6-143P-201ENST00000516942 93 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNA5SP471-201ENST00000516971 106 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RNU6-1315P-201ENST00000517187 99 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.17□□□□□ -1.74
COL6A2P12110 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC011494.1-201ENST00000596454 237 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.17□□□□□ -1.74
COL6A2P12110 AC098826.3-201ENST00000603823 466 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC011890.2-201ENST00000613393 294 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 RMST_4.1-201ENST00000616886 107 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 Z99571.1-201ENST00000636677 394 ntBASIC4.17□□□□□ -1.74
COL6A2P12110 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
COL6A2P12110 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL6A2P12110 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL6A2P12110 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.16□□□□□ -1.74
COL6A2P12110 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL6A2P12110 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.16□□□□□ -1.74
COL6A2P12110 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL6A2P12110 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL6A2P12110 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.16□□□□□ -1.74
COL6A2P12110 AC079741.1-201ENST00000321498 212 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 RNA5SP332-201ENST00000391063 115 ntBASIC4.16□□□□□ -1.74
COL6A2P12110 SNORA3C-201ENST00000408792 125 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms