Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
PCNAP12004 FAM133DP-201ENST00000464802 691 ntBASIC3.28□□□□□ -1.88
PCNAP12004 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
PCNAP12004 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.28□□□□□ -1.88
PCNAP12004 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.28□□□□□ -1.88
PCNAP12004 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.28□□□□□ -1.88
PCNAP12004 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 AC104763.2-201ENST00000604179 382 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AL109618.2-201ENST00000605527 211 ntBASIC3.28□□□□□ -1.88
PCNAP12004 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 AL365204.3-201ENST00000612448 685 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AC012409.4-201ENST00000612923 249 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
PCNAP12004 AC012442.3-202ENST00000636742 206 ntBASIC3.28□□□□□ -1.88
PCNAP12004 MIR3688-2-201ENST00000636963 87 ntBASIC3.28□□□□□ -1.88
PCNAP12004 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.28□□□□□ -1.88
PCNAP12004 MTND5P42-201ENST00000637720 498 ntBASIC3.28□□□□□ -1.88
PCNAP12004 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.28□□□□□ -1.88
PCNAP12004 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCNAP12004 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCNAP12004 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCNAP12004 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCNAP12004 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCNAP12004 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 Y_RNA.9-201ENST00000362354 101 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RNU6-190P-201ENST00000384154 102 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RNU6-606P-201ENST00000384721 111 ntBASIC3.27□□□□□ -1.89
PCNAP12004 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCNAP12004 USP9YP27-201ENST00000418455 438 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
PCNAP12004 MTCO1P20-201ENST00000425366 358 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AL451062.2-201ENST00000427515 271 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
PCNAP12004 HMGB1P27-201ENST00000431429 603 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 AL591212.2-201ENST00000433923 257 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC016691.1-201ENST00000441321 413 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 ELOCP23-201ENST00000452014 332 ntBASIC3.27□□□□□ -1.89
PCNAP12004 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RNU7-182P-201ENST00000459009 62 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RNA5SP310-201ENST00000459084 116 ntBASIC3.27□□□□□ -1.89
PCNAP12004 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.27□□□□□ -1.89
PCNAP12004 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 RNU6-1281P-201ENST00000516223 105 ntBASIC3.27□□□□□ -1.89
PCNAP12004 SNORA40.12-201ENST00000516329 111 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC026403.1-201ENST00000518938 295 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 AC034105.4-201ENST00000568304 277 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
PCNAP12004 MIR3922-201ENST00000585192 84 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC008521.1-201ENST00000587471 187 ntBASIC3.27□□□□□ -1.89
PCNAP12004 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 AC098826.3-201ENST00000603823 466 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC022893.3-201ENST00000607665 437 ntBASIC3.27□□□□□ -1.89
PCNAP12004 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 AC034102.8-201ENST00000615146 484 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC007014.2-201ENST00000615581 479 ntBASIC3.27□□□□□ -1.89
PCNAP12004 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 AP003122.6-201ENST00000623831 495 ntBASIC3.27□□□□□ -1.89
PCNAP12004 AC005609.4-201ENST00000625071 447 ntBASIC3.27□□□□□ -1.89
PCNAP12004 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.27□□□□□ -1.89
PCNAP12004 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCNAP12004 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCNAP12004 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
PCNAP12004 MTND5P17-201ENST00000418405 1603 ntBASIC3.26□□□□□ -1.89
PCNAP12004 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCNAP12004 AL137003.2-201ENST00000606924 2538 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.26□□□□□ -1.89
PCNAP12004 Y_RNA.38-201ENST00000362617 102 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RNU6-1167P-201ENST00000363227 94 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RNU6-1322P-201ENST00000364309 107 ntBASIC3.26□□□□□ -1.89
PCNAP12004 Y_RNA.248-201ENST00000364501 109 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 Y_RNA.402-201ENST00000383972 102 ntBASIC3.26□□□□□ -1.89
PCNAP12004 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
PCNAP12004 CIR1P3-201ENST00000405137 479 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RNA5SP31-201ENST00000411144 127 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RPS12P24-201ENST00000412619 387 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
PCNAP12004 NDUFB4P5-201ENST00000415445 361 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.26□□□□□ -1.89
PCNAP12004 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.26□□□□□ -1.89
PCNAP12004 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
PCNAP12004 AL592045.1-201ENST00000429867 352 ntBASIC3.26□□□□□ -1.89
PCNAP12004 GTF2IP20-201ENST00000431663 360 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AL596276.1-201ENST00000434465 418 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AL118520.1-201ENST00000450770 291 ntBASIC3.26□□□□□ -1.89
PCNAP12004 RPS20P22-201ENST00000473700 357 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AL135752.1-201ENST00000479477 471 ntBASIC3.26□□□□□ -1.89
PCNAP12004 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.26□□□□□ -1.89
PCNAP12004 AC104806.1-201ENST00000508720 308 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms