Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC004241.3-201ENST00000611728 517 ntBASIC0.95□□□□□ -2.26
TOP2AP11388 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.95□□□□□ -2.26
TOP2AP11388 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 RNU6-193P-201ENST00000410977 107 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC109635.4-202ENST00000531666 412 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC087045.1-201ENST00000605856 382 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC103810.8-201ENST00000607347 118 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 AC068880.5-201ENST00000624331 290 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AL137003.2-201ENST00000606924 2538 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 ZNF702P-202ENST00000434269 1966 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TOP2AP11388 VTRNA1-3-201ENST00000365645 89 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TOP2AP11388 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 OR9R1P-201ENST00000412200 877 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC010627.1-201ENST00000503819 1294 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 OR5B19P-201ENST00000531766 928 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.94□□□□□ -2.26
TOP2AP11388 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 AL355802.3-201ENST00000607571 545 ntBASIC0.94□□□□□ -2.26
TOP2AP11388 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.94□□□□□ -2.26
TOP2AP11388 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
TOP2AP11388 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.93□□□□□ -2.26
TOP2AP11388 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.93□□□□□ -2.26
TOP2AP11388 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
TOP2AP11388 CYCSP2-201ENST00000558168 301 ntBASIC0.93□□□□□ -2.26
TOP2AP11388 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TOP2AP11388 MIR515-2-201ENST00000384883 83 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 MIR515-1-201ENST00000384884 83 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 TPTE2P6-202ENST00000445572 1007 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 KLF3P2-201ENST00000465138 268 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.92□□□□□ -2.26
TOP2AP11388 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
TOP2AP11388 NIFKP8-201ENST00000560500 874 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 AC020923.1-201ENST00000624021 917 ntBASIC0.92□□□□□ -2.26
TOP2AP11388 SNORD26-201ENST00000384147 75 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 RN7SKP200-201ENST00000410564 320 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.91□□□□□ -2.26
TOP2AP11388 HMGB1P38-201ENST00000490557 577 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.91□□□□□ -2.26
TOP2AP11388 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.91□□□□□ -2.26
TOP2AP11388 AP003355.1-201ENST00000518956 587 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.91□□□□□ -2.26
TOP2AP11388 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.91□□□□□ -2.26
TOP2AP11388 AL773524.1-201ENST00000614065 229 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 AC145207.9-201ENST00000623802 325 ntBASIC0.91□□□□□ -2.26
TOP2AP11388 UBE2V1P6-201ENST00000430840 422 ntBASIC0.9□□□□□ -2.26
TOP2AP11388 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.9□□□□□ -2.26
TOP2AP11388 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.9□□□□□ -2.26
TOP2AP11388 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.9□□□□□ -2.26
TOP2AP11388 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.9□□□□□ -2.26
TOP2AP11388 CBX3P3-201ENST00000508108 532 ntBASIC0.9□□□□□ -2.26
TOP2AP11388 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.9□□□□□ -2.26
TOP2AP11388 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.9□□□□□ -2.26
TOP2AP11388 AC004817.2-201ENST00000561794 651 ntBASIC0.9□□□□□ -2.26
TOP2AP11388 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.9□□□□□ -2.26
TOP2AP11388 DUXAP11-201ENST00000603858 526 ntBASIC0.9□□□□□ -2.26
TOP2AP11388 AC243829.6-201ENST00000612652 106 ntBASIC0.9□□□□□ -2.26
TOP2AP11388 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
TOP2AP11388 MTND5P11-201ENST00000511037 1812 ntBASIC0.9□□□□□ -2.27
TOP2AP11388 RNU6-198P-201ENST00000384258 104 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 RNU6-225P-201ENST00000384613 103 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 AC092393.1-201ENST00000439625 742 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 RNA5SP310-201ENST00000459084 116 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 RPL30P14-201ENST00000482744 348 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 OR10V3P-201ENST00000525712 725 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 MIR4529-201ENST00000578110 78 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.89□□□□□ -2.27
TOP2AP11388 AC040174.2-201ENST00000602701 465 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.89□□□□□ -2.27
TOP2AP11388 AC132825.8-201ENST00000640783 297 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
TOP2AP11388 RNU1-72P-201ENST00000362976 153 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 MIR92A1-201ENST00000385233 78 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
TOP2AP11388 MTATP6P22-201ENST00000507369 598 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 OR6C7P-201ENST00000547875 934 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 AL355812.1-201ENST00000603215 216 ntBASIC0.89□□□□□ -2.27
TOP2AP11388 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TOP2AP11388 RPL23AP33-201ENST00000442301 452 ntBASIC0.88□□□□□ -2.27
TOP2AP11388 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.88□□□□□ -2.27
TOP2AP11388 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.88□□□□□ -2.27
TOP2AP11388 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.88□□□□□ -2.27
TOP2AP11388 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.88□□□□□ -2.27
TOP2AP11388 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TOP2AP11388 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
TOP2AP11388 AL513475.1-201ENST00000406602 315 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.87□□□□□ -2.27
TOP2AP11388 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.87□□□□□ -2.27
TOP2AP11388 AC018630.2-202ENST00000422992 927 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 RNF2P1-201ENST00000442955 1010 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 AC079776.3-201ENST00000450665 370 ntBASIC0.87□□□□□ -2.27
TOP2AP11388 RNA5SP165-201ENST00000517142 115 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms