Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNU6-456P-201ENST00000384493 107 ntBASIC3.01□□□□□ -1.93
CD48P09326 Y_RNA.573-201ENST00000384763 105 ntBASIC3.01□□□□□ -1.93
CD48P09326 MIR181A2-201ENST00000384863 110 ntBASIC3.01□□□□□ -1.93
CD48P09326 RNU4-65P-201ENST00000410473 140 ntBASIC3.01□□□□□ -1.93
CD48P09326 Y_RNA.604-201ENST00000410574 102 ntBASIC3.01□□□□□ -1.93
CD48P09326 USP9YP6-201ENST00000413550 854 ntBASIC3.01□□□□□ -1.93
CD48P09326 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 NEK4P1-201ENST00000433383 879 ntBASIC3.01□□□□□ -1.93
CD48P09326 WASF1P1-201ENST00000447560 1131 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC234775.1-201ENST00000454247 670 ntBASIC3.01□□□□□ -1.93
CD48P09326 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 RPL36AP51-201ENST00000487216 318 ntBASIC3.01□□□□□ -1.93
CD48P09326 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.01□□□□□ -1.93
CD48P09326 PRDX4P1-201ENST00000507189 574 ntBASIC3.01□□□□□ -1.93
CD48P09326 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 AC105914.1-201ENST00000511798 226 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.01□□□□□ -1.93
CD48P09326 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.01□□□□□ -1.93
CD48P09326 AC128657.1-201ENST00000549459 145 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC068135.2-201ENST00000569293 1028 ntBASIC3.01□□□□□ -1.93
CD48P09326 MIR5195-201ENST00000583555 115 ntBASIC3.01□□□□□ -1.93
CD48P09326 MIR4293-201ENST00000584305 78 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC098848.2-201ENST00000588023 330 ntBASIC3.01□□□□□ -1.93
CD48P09326 GLUD1P4-201ENST00000590914 418 ntBASIC3.01□□□□□ -1.93
CD48P09326 AC025449.1-201ENST00000603896 529 ntBASIC3.01□□□□□ -1.93
CD48P09326 AL020991.1-201ENST00000612314 373 ntBASIC3.01□□□□□ -1.93
CD48P09326 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CD48P09326 AL353748.2-201ENST00000622148 471 ntBASIC3.01□□□□□ -1.93
CD48P09326 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.01□□□□□ -1.93
CD48P09326 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CD48P09326 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CD48P09326 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CD48P09326 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3□□□□□ -1.93
CD48P09326 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD48P09326 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
CD48P09326 DDX10P1-201ENST00000448545 1933 ntBASIC3□□□□□ -1.93
CD48P09326 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CD48P09326 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 Y_RNA.111-201ENST00000363248 100 ntBASIC3□□□□□ -1.93
CD48P09326 RNU5E-8P-201ENST00000363502 116 ntBASIC3□□□□□ -1.93
CD48P09326 RNU6-483P-201ENST00000384088 108 ntBASIC3□□□□□ -1.93
CD48P09326 MIR558-201ENST00000384920 94 ntBASIC3□□□□□ -1.93
CD48P09326 MIR887-201ENST00000401258 79 ntBASIC3□□□□□ -1.93
CD48P09326 FGF7P8-201ENST00000402994 292 ntBASIC3□□□□□ -1.93
CD48P09326 RPL5P18-201ENST00000406671 891 ntBASIC3□□□□□ -1.93
CD48P09326 Z92545.1-201ENST00000411782 234 ntBASIC3□□□□□ -1.93
CD48P09326 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 MTCO1P20-201ENST00000425366 358 ntBASIC3□□□□□ -1.93
CD48P09326 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 AC090774.1-201ENST00000435925 246 ntBASIC3□□□□□ -1.93
CD48P09326 AL662791.1-201ENST00000441992 928 ntBASIC3□□□□□ -1.93
CD48P09326 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3□□□□□ -1.93
CD48P09326 AC140076.1-201ENST00000449897 361 ntBASIC3□□□□□ -1.93
CD48P09326 GSTA11P-201ENST00000452866 669 ntBASIC3□□□□□ -1.93
CD48P09326 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3□□□□□ -1.93
CD48P09326 AC027673.1-201ENST00000456245 405 ntBASIC3□□□□□ -1.93
CD48P09326 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 RPL27AP5-201ENST00000469428 449 ntBASIC3□□□□□ -1.93
CD48P09326 RPS29P26-201ENST00000477483 171 ntBASIC3□□□□□ -1.93
CD48P09326 AC092989.1-201ENST00000481235 277 ntBASIC3□□□□□ -1.93
CD48P09326 RPS29P25-201ENST00000481709 171 ntBASIC3□□□□□ -1.93
CD48P09326 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 RNA5SP341-201ENST00000516261 117 ntBASIC3□□□□□ -1.93
CD48P09326 RNU6-410P-201ENST00000517006 107 ntBASIC3□□□□□ -1.93
CD48P09326 RNU6-64P-201ENST00000517119 105 ntBASIC3□□□□□ -1.93
CD48P09326 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
CD48P09326 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3□□□□□ -1.93
CD48P09326 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3□□□□□ -1.93
CD48P09326 AC118273.2-201ENST00000532092 465 ntBASIC3□□□□□ -1.93
CD48P09326 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3□□□□□ -1.93
CD48P09326 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3□□□□□ -1.93
CD48P09326 HMGB1P6-201ENST00000569046 646 ntBASIC3□□□□□ -1.93
CD48P09326 MTCO3P24-201ENST00000572729 782 ntBASIC3□□□□□ -1.93
CD48P09326 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3□□□□□ -1.93
CD48P09326 XIAPP1-201ENST00000603162 600 ntBASIC3□□□□□ -1.93
CD48P09326 AP000907.4-201ENST00000604143 237 ntBASIC3□□□□□ -1.93
CD48P09326 HMGN2P28-201ENST00000606102 262 ntBASIC3□□□□□ -1.93
CD48P09326 TUG1_2.1-201ENST00000614234 87 ntBASIC3□□□□□ -1.93
CD48P09326 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3□□□□□ -1.93
CD48P09326 MIR4275-201ENST00000636486 87 ntBASIC3□□□□□ -1.93
CD48P09326 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CD48P09326 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
CD48P09326 FAM35CP-201ENST00000554755 2470 ntBASIC3□□□□□ -1.93
CD48P09326 AC118273.1-201ENST00000525324 3006 ntBASIC3□□□□□ -1.93
CD48P09326 AF127577.6-201ENST00000623352 2191 ntBASIC3□□□□□ -1.93
CD48P09326 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD48P09326 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD48P09326 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CD48P09326 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CD48P09326 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CD48P09326 Y_RNA.22-201ENST00000362492 102 ntBASIC2.99□□□□□ -1.93
CD48P09326 RNU6-1284P-201ENST00000363701 100 ntBASIC2.99□□□□□ -1.93
CD48P09326 RNU6-606P-201ENST00000384721 111 ntBASIC2.99□□□□□ -1.93
CD48P09326 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms