Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 Z95331.1-201ENST00000623075 23112 ntBASIC4.81□□□□□ -1.64
THBS1P07996 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
THBS1P07996 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
THBS1P07996 Y_RNA.75-201ENST00000362927 97 ntBASIC4.81□□□□□ -1.64
THBS1P07996 Y_RNA.331-201ENST00000365267 102 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RNU6-541P-201ENST00000384709 110 ntBASIC4.81□□□□□ -1.64
THBS1P07996 MIR32-201ENST00000384965 70 ntBASIC4.81□□□□□ -1.64
THBS1P07996 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RAB9AP3-201ENST00000412737 573 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC007738.1-201ENST00000413892 348 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC010154.1-201ENST00000425857 269 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.81□□□□□ -1.64
THBS1P07996 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.81□□□□□ -1.64
THBS1P07996 RAB9AP1-201ENST00000449393 573 ntBASIC4.81□□□□□ -1.64
THBS1P07996 IGHV5-78-201ENST00000450948 295 ntBASIC4.81□□□□□ -1.64
THBS1P07996 NUTF2P7-201ENST00000453086 375 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.81□□□□□ -1.64
THBS1P07996 RPS5P7-201ENST00000456664 608 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AP000870.1-201ENST00000472927 406 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RPS27AP9-201ENST00000477681 438 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RN7SL30P-201ENST00000488416 306 ntBASIC4.81□□□□□ -1.64
THBS1P07996 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 AC010265.1-201ENST00000513509 211 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RNU6-567P-201ENST00000516746 107 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC126177.5-201ENST00000549599 178 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC055872.1-201ENST00000570978 278 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.81□□□□□ -1.64
THBS1P07996 MIR548X2-201ENST00000579776 100 ntBASIC4.81□□□□□ -1.64
THBS1P07996 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 AL008718.3-201ENST00000610217 321 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC068831.7-201ENST00000616954 363 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC027309.3-201ENST00000623419 351 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.81□□□□□ -1.64
THBS1P07996 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.81□□□□□ -1.64
THBS1P07996 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
THBS1P07996 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
THBS1P07996 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 AC009812.4-201ENST00000569134 1805 ntBASIC4.81□□□□□ -1.64
THBS1P07996 AC026951.1-201ENST00000559530 2459 ntBASIC4.81□□□□□ -1.64
THBS1P07996 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
THBS1P07996 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
THBS1P07996 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.81□□□□□ -1.64
THBS1P07996 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
THBS1P07996 AC010332.2-201ENST00000613083 1904 ntBASIC4.8□□□□□ -1.64
THBS1P07996 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.8□□□□□ -1.64
THBS1P07996 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
THBS1P07996 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
THBS1P07996 U3.3-201ENST00000362986 216 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RNU6-653P-201ENST00000363074 106 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RNA5SP197-201ENST00000363357 119 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RNU6-137P-201ENST00000363680 108 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RNU6-20P-201ENST00000384106 107 ntBASIC4.8□□□□□ -1.64
THBS1P07996 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 RPS26P47-201ENST00000427219 348 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC011742.1-201ENST00000431448 434 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RPS29P10-201ENST00000439197 166 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.8□□□□□ -1.64
THBS1P07996 AL590399.6-201ENST00000446396 307 ntBASIC4.8□□□□□ -1.64
THBS1P07996 MRPS10P1-201ENST00000448483 130 ntBASIC4.8□□□□□ -1.64
THBS1P07996 FABP5P15-201ENST00000453566 214 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.8□□□□□ -1.64
THBS1P07996 RN7SL329P-201ENST00000467740 299 ntBASIC4.8□□□□□ -1.64
THBS1P07996 OR2AO1P-201ENST00000476497 403 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RPS4XP22-201ENST00000480755 780 ntBASIC4.8□□□□□ -1.64
THBS1P07996 RPS21P4-201ENST00000487122 248 ntBASIC4.8□□□□□ -1.64
THBS1P07996 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.8□□□□□ -1.64
THBS1P07996 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.8□□□□□ -1.64
THBS1P07996 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.8□□□□□ -1.64
THBS1P07996 AC004980.4-201ENST00000513375 203 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.8□□□□□ -1.64
THBS1P07996 HMGB1P14-201ENST00000557424 591 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC044860.2-201ENST00000561005 179 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC090617.7-201ENST00000623952 126 ntBASIC4.8□□□□□ -1.64
THBS1P07996 SCARNA4-202ENST00000625402 129 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
THBS1P07996 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 OR4G2P-202ENST00000641004 1759 ntBASIC4.8□□□□□ -1.64
THBS1P07996 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
THBS1P07996 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
THBS1P07996 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
THBS1P07996 MUC2-202ENST00000613187 4845 ntBASIC4.79□□□□□ -1.64
THBS1P07996 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
THBS1P07996 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
THBS1P07996 AL445487.1-201ENST00000415694 1580 ntBASIC4.79□□□□□ -1.64
THBS1P07996 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
THBS1P07996 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
THBS1P07996 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
THBS1P07996 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
THBS1P07996 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms