Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC040896.1-201ENST00000613819 479 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 MIR7112-201ENST00000616126 65 ntBASIC4.03□□□□□ -1.76
HLA-DOAP06340 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HLA-DOAP06340 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DOAP06340 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.03□□□□□ -1.77
HLA-DOAP06340 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AL049555.1-201ENST00000562834 1933 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 RNU6-61P-201ENST00000365528 109 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 UBE2FP1-201ENST00000416536 447 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 SSXP9-201ENST00000417503 292 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 CYCSP32-201ENST00000440548 321 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AL357552.1-201ENST00000445254 415 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 RPL21P13-201ENST00000488305 481 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC110794.1-201ENST00000505816 425 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC005741.1-201ENST00000511094 432 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 RNU6-559P-201ENST00000516151 98 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 Y_RNA.682-201ENST00000516457 100 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AP006245.1-201ENST00000522549 120 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 BNIP3P25-201ENST00000596023 559 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC010680.4-201ENST00000605334 543 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 HMGN2P28-201ENST00000606102 262 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC084781.2-201ENST00000615568 161 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 uc_338.34-201ENST00000617467 174 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 AC025034.2-201ENST00000623264 286 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.02□□□□□ -1.77
HLA-DOAP06340 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DOAP06340 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DOAP06340 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC073073.2-201ENST00000609827 2578 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 RNU6-179P-201ENST00000363350 107 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 RNA5SP197-201ENST00000363357 119 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 Y_RNA.339-201ENST00000365325 102 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 MIR548F5-201ENST00000408421 86 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 RNU6-712P-201ENST00000410558 100 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 BTF3L4P3-201ENST00000418879 476 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 RPS12P23-201ENST00000419579 400 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC006028.1-201ENST00000438379 402 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC234775.1-201ENST00000454247 670 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 FGF7P3-201ENST00000454645 303 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 snoU13.3-201ENST00000459441 104 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 RPL7P43-201ENST00000478876 753 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC027575.1-201ENST00000481064 460 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 RBBP4P6-201ENST00000508098 202 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 ELOCP31-201ENST00000540463 467 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 MIR5680-201ENST00000577577 84 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 APOOP1-201ENST00000604695 592 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 YPEL5P2-201ENST00000605553 359 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC116312.1-201ENST00000606841 314 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AL133215.3-201ENST00000609801 448 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AL390240.1-201ENST00000612950 384 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 U73479.1-201ENST00000618062 168 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 AC090971.5-201ENST00000621102 293 ntBASIC4.01□□□□□ -1.77
HLA-DOAP06340 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DOAP06340 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DOAP06340 MTCO1P24-201ENST00000515438 1558 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms