Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC024619.4-201ENST00000580924 316 ntBASIC1.79□□□□□ -2.12
APOEP02649 AC105245.1-201ENST00000581934 244 ntBASIC1.79□□□□□ -2.12
APOEP02649 AC011451.2-201ENST00000604303 598 ntBASIC1.79□□□□□ -2.12
APOEP02649 MIR502-201ENST00000606349 86 ntBASIC1.79□□□□□ -2.12
APOEP02649 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
APOEP02649 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.79□□□□□ -2.12
APOEP02649 AC013476.2-201ENST00000614456 459 ntBASIC1.79□□□□□ -2.12
APOEP02649 AC012150.2-201ENST00000621300 544 ntBASIC1.79□□□□□ -2.12
APOEP02649 AL158801.5-201ENST00000623123 465 ntBASIC1.79□□□□□ -2.12
APOEP02649 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.79□□□□□ -2.12
APOEP02649 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
APOEP02649 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.78□□□□□ -2.12
APOEP02649 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
APOEP02649 AL356473.1-201ENST00000406203 1408 ntBASIC1.78□□□□□ -2.12
APOEP02649 RNA5SP276-201ENST00000362580 94 ntBASIC1.78□□□□□ -2.12
APOEP02649 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
APOEP02649 AL512604.1-201ENST00000404812 257 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC027644.1-201ENST00000419595 298 ntBASIC1.78□□□□□ -2.12
APOEP02649 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
APOEP02649 MTCYBP11-201ENST00000447254 1109 ntBASIC1.78□□□□□ -2.12
APOEP02649 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.78□□□□□ -2.12
APOEP02649 MTCO1P42-201ENST00000457379 726 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.78□□□□□ -2.12
APOEP02649 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.78□□□□□ -2.12
APOEP02649 AC026801.1-201ENST00000497178 464 ntBASIC1.78□□□□□ -2.12
APOEP02649 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.78□□□□□ -2.12
APOEP02649 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.78□□□□□ -2.12
APOEP02649 AC022861.1-201ENST00000522981 663 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC044913.1-201ENST00000557200 430 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC138915.2-201ENST00000569776 97 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC090330.1-201ENST00000588646 764 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC005261.5-201ENST00000596280 355 ntBASIC1.78□□□□□ -2.12
APOEP02649 AL035411.2-201ENST00000604022 421 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.78□□□□□ -2.12
APOEP02649 AC104763.3-201ENST00000613765 618 ntBASIC1.78□□□□□ -2.12
APOEP02649 AC002550.2-201ENST00000621246 394 ntBASIC1.78□□□□□ -2.12
APOEP02649 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.13
APOEP02649 AP005901.5-201ENST00000545779 1796 ntBASIC1.77□□□□□ -2.13
APOEP02649 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
APOEP02649 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
APOEP02649 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
APOEP02649 AC008555.8-201ENST00000623602 2168 ntBASIC1.77□□□□□ -2.13
APOEP02649 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.77□□□□□ -2.13
APOEP02649 SNRPEP3-201ENST00000338402 276 ntBASIC1.77□□□□□ -2.13
APOEP02649 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
APOEP02649 RPS3AP44-201ENST00000425466 790 ntBASIC1.77□□□□□ -2.13
APOEP02649 SKA2P1-201ENST00000425592 390 ntBASIC1.77□□□□□ -2.13
APOEP02649 DEFB130D-201ENST00000426866 237 ntBASIC1.77□□□□□ -2.13
APOEP02649 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.77□□□□□ -2.13
APOEP02649 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.77□□□□□ -2.13
APOEP02649 AC092427.1-201ENST00000439177 601 ntBASIC1.77□□□□□ -2.13
APOEP02649 AC016691.1-201ENST00000441321 413 ntBASIC1.77□□□□□ -2.13
APOEP02649 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.77□□□□□ -2.13
APOEP02649 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.77□□□□□ -2.13
APOEP02649 AF213884.2-201ENST00000510417 903 ntBASIC1.77□□□□□ -2.13
APOEP02649 AC091965.2-201ENST00000512324 613 ntBASIC1.77□□□□□ -2.13
APOEP02649 SNORA48.9-201ENST00000516419 162 ntBASIC1.77□□□□□ -2.13
APOEP02649 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.77□□□□□ -2.13
APOEP02649 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.77□□□□□ -2.13
APOEP02649 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.77□□□□□ -2.13
APOEP02649 MIR4524B-201ENST00000581569 115 ntBASIC1.77□□□□□ -2.13
APOEP02649 MIR4637-201ENST00000582405 84 ntBASIC1.77□□□□□ -2.13
APOEP02649 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.77□□□□□ -2.13
APOEP02649 AC002545.1-201ENST00000592511 181 ntBASIC1.77□□□□□ -2.13
APOEP02649 AP001542.2-201ENST00000593141 364 ntBASIC1.77□□□□□ -2.13
APOEP02649 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
APOEP02649 AL390208.1-201ENST00000605885 644 ntBASIC1.77□□□□□ -2.13
APOEP02649 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.77□□□□□ -2.13
APOEP02649 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.77□□□□□ -2.13
APOEP02649 AC087821.2-201ENST00000637086 450 ntBASIC1.77□□□□□ -2.13
APOEP02649 AC110491.1-201ENST00000562191 2010 ntBASIC1.77□□□□□ -2.13
APOEP02649 ADAM3A-203ENST00000461344 2157 ntBASIC1.76□□□□□ -2.13
APOEP02649 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
APOEP02649 RNU4-42P-201ENST00000364738 142 ntBASIC1.76□□□□□ -2.13
APOEP02649 MIR506-201ENST00000384998 124 ntBASIC1.76□□□□□ -2.13
APOEP02649 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
APOEP02649 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.76□□□□□ -2.13
APOEP02649 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.76□□□□□ -2.13
APOEP02649 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.76□□□□□ -2.13
APOEP02649 AL357078.2-201ENST00000416486 427 ntBASIC1.76□□□□□ -2.13
APOEP02649 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.76□□□□□ -2.13
APOEP02649 AC096920.1-201ENST00000423991 241 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.76□□□□□ -2.13
APOEP02649 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.76□□□□□ -2.13
APOEP02649 MRPL42P4-201ENST00000453267 443 ntBASIC1.76□□□□□ -2.13
APOEP02649 RPL21P134-201ENST00000453468 483 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC244505.3-201ENST00000454598 187 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC107032.1-201ENST00000485945 480 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC079203.1-201ENST00000487972 404 ntBASIC1.76□□□□□ -2.13
APOEP02649 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.76□□□□□ -2.13
APOEP02649 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.76□□□□□ -2.13
APOEP02649 RNU6-1261P-201ENST00000517194 104 ntBASIC1.76□□□□□ -2.13
APOEP02649 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
APOEP02649 AC022880.1-201ENST00000534017 973 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.76□□□□□ -2.13
APOEP02649 AC015712.3-201ENST00000559380 164 ntBASIC1.76□□□□□ -2.13
APOEP02649 AC104581.2-201ENST00000572227 430 ntBASIC1.76□□□□□ -2.13
APOEP02649 MIR4765-201ENST00000585007 77 ntBASIC1.76□□□□□ -2.13
APOEP02649 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.76□□□□□ -2.13
APOEP02649 AC068276.1-201ENST00000605793 379 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms