Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.09□□□□□ -1.91
GGPS1O95749 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC011979.2-201ENST00000527568 352 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC109446.2-201ENST00000567872 497 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 AC099654.13-201ENST00000639774 207 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 MTND5P7-201ENST00000413558 1798 ntBASIC3.09□□□□□ -1.91
GGPS1O95749 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.09□□□□□ -1.92
GGPS1O95749 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
GGPS1O95749 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GGPS1O95749 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GGPS1O95749 UBE2L2-201ENST00000254302 429 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 RNU6-817P-201ENST00000391083 104 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 RNA5SP354-201ENST00000391247 136 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 SEPT2P1-201ENST00000419651 180 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 MTND2P18-201ENST00000419962 1030 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.08□□□□□ -1.92
GGPS1O95749 NEFMP1-201ENST00000443423 1006 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 WASF1P1-201ENST00000447560 1131 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC098826.2-201ENST00000452011 651 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 RPL26P9-201ENST00000457466 433 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 MRPS17P3-201ENST00000465453 385 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AC003982.1-202ENST00000469928 248 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 RPL36AP51-201ENST00000487216 318 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 SUMO2P6-201ENST00000505273 288 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 RNU2-10P-201ENST00000516375 211 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 SUB1P1-201ENST00000524415 382 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AP003181.2-201ENST00000528941 181 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AP003122.4-201ENST00000530980 758 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC020895.1-201ENST00000595362 272 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AL358072.1-201ENST00000604156 575 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.08□□□□□ -1.92
GGPS1O95749 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 AC008498.1-201ENST00000613012 531 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AC025594.3-201ENST00000613068 790 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GGPS1O95749 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
GGPS1O95749 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
GGPS1O95749 AL137003.2-201ENST00000606924 2538 ntBASIC3.08□□□□□ -1.92
GGPS1O95749 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
GGPS1O95749 RNU4-1-201ENST00000363925 141 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 RNU5E-6P-201ENST00000365574 115 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AL021407.1-201ENST00000404531 386 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AL590004.2-201ENST00000404787 371 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.07□□□□□ -1.92
GGPS1O95749 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 AC009414.1-201ENST00000427200 443 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.07□□□□□ -1.92
GGPS1O95749 GTF2IP20-201ENST00000431663 360 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 GPM6BP2-201ENST00000432046 144 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 HMGB3P12-201ENST00000438745 556 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 GPM6BP1-201ENST00000446387 144 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 SNRPFP4-201ENST00000456366 242 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.07□□□□□ -1.92
GGPS1O95749 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.07□□□□□ -1.92
GGPS1O95749 AC114781.4-201ENST00000513707 639 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 RNU4-29P-201ENST00000515943 174 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 RNA5SP165-201ENST00000517142 115 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 AP003467.2-201ENST00000520175 319 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC022634.1-201ENST00000520765 532 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 MRPS36P5-201ENST00000551909 298 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.07□□□□□ -1.92
GGPS1O95749 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.07□□□□□ -1.92
GGPS1O95749 MTND4LP5-201ENST00000605152 292 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 AC019226.2-201ENST00000625973 424 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 U2.21-201ENST00000637295 81 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 ZNF519P1-201ENST00000449011 1626 ntBASIC3.07□□□□□ -1.92
GGPS1O95749 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GGPS1O95749 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.07□□□□□ -1.92
GGPS1O95749 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
GGPS1O95749 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
GGPS1O95749 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 RPL9P7-201ENST00000330965 580 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 RNU4-21P-201ENST00000362802 126 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 RNU6-512P-201ENST00000364438 103 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 SMIM11P1-201ENST00000369586 178 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GGPS1O95749 Y_RNA.598-201ENST00000410480 95 ntBASIC3.06□□□□□ -1.92
GGPS1O95749 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
GGPS1O95749 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms