Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNU2-39P-201ENST00000410604 198 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AC007899.1-201ENST00000412776 775 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 AL365338.1-201ENST00000422282 858 ntBASIC3.35□□□□□ -1.87
RTN3O95197 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 RPL36AP53-201ENST00000432891 316 ntBASIC3.35□□□□□ -1.87
RTN3O95197 MTND4P32-201ENST00000437189 1237 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 MTND1P29-201ENST00000448112 647 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AC115115.1-201ENST00000449927 248 ntBASIC3.35□□□□□ -1.87
RTN3O95197 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN3O95197 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN3O95197 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN3O95197 RNU6-143P-201ENST00000516942 93 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNU6-1220P-201ENST00000517126 108 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNA5SP165-201ENST00000517142 115 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN3O95197 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN3O95197 MIR4528-201ENST00000577763 90 ntBASIC3.35□□□□□ -1.87
RTN3O95197 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 BNIP3P9-201ENST00000603714 553 ntBASIC3.35□□□□□ -1.87
RTN3O95197 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
RTN3O95197 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
RTN3O95197 AC099506.2-201ENST00000623074 221 ntBASIC3.35□□□□□ -1.87
RTN3O95197 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN3O95197 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN3O95197 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN3O95197 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTN3O95197 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTN3O95197 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTN3O95197 Y_RNA.51-201ENST00000362725 102 ntBASIC3.34□□□□□ -1.87
RTN3O95197 RNU6-884P-201ENST00000363889 107 ntBASIC3.34□□□□□ -1.87
RTN3O95197 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.34□□□□□ -1.87
RTN3O95197 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTN3O95197 RNU6-641P-201ENST00000384006 107 ntBASIC3.34□□□□□ -1.87
RTN3O95197 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.34□□□□□ -1.87
RTN3O95197 CDK8P2-201ENST00000415020 547 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 BX295541.1-201ENST00000417774 250 ntBASIC3.34□□□□□ -1.87
RTN3O95197 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.34□□□□□ -1.87
RTN3O95197 AL591212.2-201ENST00000433923 257 ntBASIC3.34□□□□□ -1.87
RTN3O95197 FTH1P25-201ENST00000447665 469 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.34□□□□□ -1.87
RTN3O95197 RPL26P9-201ENST00000457466 433 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC093899.1-201ENST00000457984 376 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC004924.1-201ENST00000480160 781 ntBASIC3.34□□□□□ -1.87
RTN3O95197 RN7SL499P-201ENST00000481141 276 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC006445.1-201ENST00000491925 405 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 AC117522.1-201ENST00000509821 380 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 MTCO3P28-201ENST00000513351 515 ntBASIC3.34□□□□□ -1.87
RTN3O95197 SCARNA24.1-201ENST00000516465 137 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC090572.1-201ENST00000519251 160 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.34□□□□□ -1.87
RTN3O95197 AP003072.2-201ENST00000527756 676 ntBASIC3.34□□□□□ -1.87
RTN3O95197 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.34□□□□□ -1.87
RTN3O95197 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTN3O95197 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 AC012213.3-201ENST00000577199 777 ntBASIC3.34□□□□□ -1.87
RTN3O95197 MIR3913-1-201ENST00000577744 102 ntBASIC3.34□□□□□ -1.87
RTN3O95197 MIR4325-201ENST00000583049 90 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.34□□□□□ -1.87
RTN3O95197 AC080013.6-201ENST00000606185 215 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC245008.1-201ENST00000608123 476 ntBASIC3.34□□□□□ -1.87
RTN3O95197 DUSP12P1-201ENST00000612874 516 ntBASIC3.34□□□□□ -1.87
RTN3O95197 AC009509.4-201ENST00000619202 509 ntBASIC3.34□□□□□ -1.87
RTN3O95197 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
RTN3O95197 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTN3O95197 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
RTN3O95197 PIGFP2-201ENST00000421400 651 ntBASIC3.33□□□□□ -1.88
RTN3O95197 HMGN2P30-201ENST00000423237 256 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AL592045.1-201ENST00000429867 352 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AC079781.2-201ENST00000446424 169 ntBASIC3.33□□□□□ -1.88
RTN3O95197 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.33□□□□□ -1.88
RTN3O95197 AL590639.1-201ENST00000456484 337 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AL122001.1-201ENST00000457027 370 ntBASIC3.33□□□□□ -1.88
RTN3O95197 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 RPL27AP5-201ENST00000469428 449 ntBASIC3.33□□□□□ -1.88
RTN3O95197 RPS29P2-201ENST00000479278 136 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.33□□□□□ -1.88
RTN3O95197 AC079140.3-201ENST00000511111 550 ntBASIC3.33□□□□□ -1.88
RTN3O95197 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.33□□□□□ -1.88
RTN3O95197 RNU1-103P-201ENST00000516502 125 ntBASIC3.33□□□□□ -1.88
RTN3O95197 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN3O95197 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms