Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2□□□□□ -2.09
PCF11O94913 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCF11O94913 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2□□□□□ -2.09
PCF11O94913 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCF11O94913 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
PCF11O94913 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.99□□□□□ -2.09
PCF11O94913 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PCF11O94913 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
PCF11O94913 RNU6-921P-201ENST00000384361 107 ntBASIC1.99□□□□□ -2.09
PCF11O94913 MIR193B-201ENST00000384907 83 ntBASIC1.99□□□□□ -2.09
PCF11O94913 AL033519.2-201ENST00000403958 392 ntBASIC1.99□□□□□ -2.09
PCF11O94913 ARF4P4-201ENST00000439608 520 ntBASIC1.99□□□□□ -2.09
PCF11O94913 MTCYBP3-201ENST00000445588 1137 ntBASIC1.99□□□□□ -2.09
PCF11O94913 AC022493.1-201ENST00000492984 337 ntBASIC1.99□□□□□ -2.09
PCF11O94913 RNU6-27P-201ENST00000516146 107 ntBASIC1.99□□□□□ -2.09
PCF11O94913 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.99□□□□□ -2.09
PCF11O94913 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.99□□□□□ -2.09
PCF11O94913 AP000254.1-201ENST00000609934 520 ntBASIC1.99□□□□□ -2.09
PCF11O94913 HMGB1P24-202ENST00000615653 685 ntBASIC1.99□□□□□ -2.09
PCF11O94913 RNU6-1035P-201ENST00000384477 107 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL121978.1-201ENST00000402778 359 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL355497.1-201ENST00000406262 551 ntBASIC1.98□□□□□ -2.09
PCF11O94913 UBE2V1P11-201ENST00000411559 285 ntBASIC1.98□□□□□ -2.09
PCF11O94913 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.98□□□□□ -2.09
PCF11O94913 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.98□□□□□ -2.09
PCF11O94913 AL691517.1-201ENST00000440833 1235 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL049714.1-201ENST00000466686 347 ntBASIC1.98□□□□□ -2.09
PCF11O94913 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.98□□□□□ -2.09
PCF11O94913 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.98□□□□□ -2.09
PCF11O94913 AL355877.2-201ENST00000603670 358 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AC091925.2-201ENST00000625059 256 ntBASIC1.98□□□□□ -2.09
PCF11O94913 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCF11O94913 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCF11O94913 RNU6-920P-201ENST00000410926 92 ntBASIC1.98□□□□□ -2.09
PCF11O94913 VN1R108P-201ENST00000431580 830 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL136380.1-201ENST00000447970 162 ntBASIC1.98□□□□□ -2.09
PCF11O94913 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PCF11O94913 AC078857.1-201ENST00000469870 667 ntBASIC1.98□□□□□ -2.09
PCF11O94913 RPL7P18-201ENST00000478965 734 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.98□□□□□ -2.09
PCF11O94913 RN7SKP265-201ENST00000516448 223 ntBASIC1.98□□□□□ -2.09
PCF11O94913 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.98□□□□□ -2.09
PCF11O94913 AC084033.1-201ENST00000550830 633 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.98□□□□□ -2.09
PCF11O94913 AC090888.1-201ENST00000561335 1141 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.98□□□□□ -2.09
PCF11O94913 AC093838.1-201ENST00000613014 469 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AC011330.2-201ENST00000621680 635 ntBASIC1.98□□□□□ -2.09
PCF11O94913 AL031601.2-202ENST00000622650 282 ntBASIC1.98□□□□□ -2.09
PCF11O94913 MTND4P27-201ENST00000450813 1354 ntBASIC1.97□□□□□ -2.09
PCF11O94913 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCF11O94913 AL355615.1-201ENST00000406187 641 ntBASIC1.97□□□□□ -2.09
PCF11O94913 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.97□□□□□ -2.09
PCF11O94913 MTCO3P2-201ENST00000457365 171 ntBASIC1.97□□□□□ -2.09
PCF11O94913 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.97□□□□□ -2.09
PCF11O94913 MRPS36P2-201ENST00000512569 299 ntBASIC1.97□□□□□ -2.09
PCF11O94913 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.97□□□□□ -2.09
PCF11O94913 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.97□□□□□ -2.09
PCF11O94913 AC118942.1-201ENST00000529674 1035 ntBASIC1.97□□□□□ -2.09
PCF11O94913 MTCYBP27-201ENST00000555160 670 ntBASIC1.97□□□□□ -2.09
PCF11O94913 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.97□□□□□ -2.09
PCF11O94913 AC095057.3-201ENST00000567102 1157 ntBASIC1.97□□□□□ -2.09
PCF11O94913 MIR1273G-201ENST00000577677 100 ntBASIC1.97□□□□□ -2.09
PCF11O94913 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.97□□□□□ -2.09
PCF11O94913 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCF11O94913 CCT4P2-201ENST00000233836 1548 ntBASIC1.96□□□□□ -2.1
PCF11O94913 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.96□□□□□ -2.1
PCF11O94913 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.96□□□□□ -2.1
PCF11O94913 ARL2BPP4-201ENST00000506854 471 ntBASIC1.96□□□□□ -2.1
PCF11O94913 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.96□□□□□ -2.1
PCF11O94913 SETP7-201ENST00000552169 453 ntBASIC1.96□□□□□ -2.1
PCF11O94913 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.96□□□□□ -2.1
PCF11O94913 AC021749.1-201ENST00000604322 607 ntBASIC1.96□□□□□ -2.1
PCF11O94913 AL137246.1-201ENST00000607072 977 ntBASIC1.96□□□□□ -2.1
PCF11O94913 FRG1HP-204ENST00000617940 757 ntBASIC1.96□□□□□ -2.1
PCF11O94913 AC009318.4-201ENST00000620496 486 ntBASIC1.96□□□□□ -2.1
PCF11O94913 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
PCF11O94913 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.96□□□□□ -2.1
PCF11O94913 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.95□□□□□ -2.1
PCF11O94913 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCF11O94913 SNORD51-201ENST00000384320 80 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AL589655.1-201ENST00000405398 482 ntBASIC1.95□□□□□ -2.1
PCF11O94913 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC093422.3-201ENST00000428506 305 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.95□□□□□ -2.1
PCF11O94913 ANKRD26P4-201ENST00000455755 950 ntBASIC1.95□□□□□ -2.1
PCF11O94913 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.95□□□□□ -2.1
PCF11O94913 RNU6-1132P-201ENST00000459214 107 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC093801.2-201ENST00000503966 1050 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.95□□□□□ -2.1
PCF11O94913 NDUFS5P6-201ENST00000529136 295 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.95□□□□□ -2.1
PCF11O94913 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.95□□□□□ -2.1
PCF11O94913 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.95□□□□□ -2.1
PCF11O94913 AC015688.2-201ENST00000584523 262 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AL161423.1-201ENST00000613700 262 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC009032.1-201ENST00000617574 431 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AC073592.7-201ENST00000623659 507 ntBASIC1.95□□□□□ -2.1
PCF11O94913 AL161722.3-201ENST00000605789 2983 ntBASIC1.95□□□□□ -2.1
PCF11O94913 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms