Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR32-201ENST00000384965 70 ntBASIC5.72□□□□□ -1.49
RNF40O75150 MIR10B-201ENST00000385011 110 ntBASIC5.72□□□□□ -1.49
RNF40O75150 MIR153-2-201ENST00000385225 87 ntBASIC5.72□□□□□ -1.49
RNF40O75150 SNORA48.4-201ENST00000391089 134 ntBASIC5.72□□□□□ -1.49
RNF40O75150 BTF3L4P2-201ENST00000392798 346 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF40O75150 RPL12P3-201ENST00000440080 396 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF40O75150 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF40O75150 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF40O75150 AC074290.1-201ENST00000448883 135 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AZGP1P2-201ENST00000454506 345 ntBASIC5.72□□□□□ -1.49
RNF40O75150 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF40O75150 RPSAP50-201ENST00000481955 852 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF40O75150 AL391261.3-201ENST00000557194 520 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AC000068.2-201ENST00000608816 460 ntBASIC5.72□□□□□ -1.49
RNF40O75150 AC116447.1-201ENST00000613153 453 ntBASIC5.72□□□□□ -1.49
RNF40O75150 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF40O75150 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF40O75150 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF40O75150 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF40O75150 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF40O75150 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF40O75150 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RNF40O75150 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF40O75150 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
RNF40O75150 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF40O75150 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF40O75150 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RNF40O75150 Z95331.1-201ENST00000623075 23112 ntBASIC5.71□□□□□ -1.49
RNF40O75150 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 AP001642.1-201ENST00000624727 2117 ntBASIC5.71□□□□□ -1.5
RNF40O75150 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF40O75150 AC110491.1-201ENST00000562191 2010 ntBASIC5.71□□□□□ -1.5
RNF40O75150 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 RNU4-80P-201ENST00000363200 141 ntBASIC5.71□□□□□ -1.5
RNF40O75150 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
RNF40O75150 Y_RNA.420-201ENST00000384043 110 ntBASIC5.71□□□□□ -1.5
RNF40O75150 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF40O75150 UBA52P6-201ENST00000399822 382 ntBASIC5.71□□□□□ -1.5
RNF40O75150 RN7SKP213-201ENST00000410746 298 ntBASIC5.71□□□□□ -1.5
RNF40O75150 RPL23AP58-201ENST00000440453 469 ntBASIC5.71□□□□□ -1.5
RNF40O75150 FABP5P15-201ENST00000453566 214 ntBASIC5.71□□□□□ -1.5
RNF40O75150 snoU13.3-201ENST00000459441 104 ntBASIC5.71□□□□□ -1.5
RNF40O75150 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF40O75150 BTF3L4P4-201ENST00000506381 449 ntBASIC5.71□□□□□ -1.5
RNF40O75150 RNU6-377P-201ENST00000515965 102 ntBASIC5.71□□□□□ -1.5
RNF40O75150 RNU6-966P-201ENST00000516479 104 ntBASIC5.71□□□□□ -1.5
RNF40O75150 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF40O75150 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.71□□□□□ -1.5
RNF40O75150 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF40O75150 AC126177.5-201ENST00000549599 178 ntBASIC5.71□□□□□ -1.5
RNF40O75150 NDUFB4P11-201ENST00000560510 395 ntBASIC5.71□□□□□ -1.5
RNF40O75150 AC006272.2-201ENST00000594725 163 ntBASIC5.71□□□□□ -1.5
RNF40O75150 AC022441.3-201ENST00000605737 136 ntBASIC5.71□□□□□ -1.5
RNF40O75150 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF40O75150 SMG1P4-204ENST00000523028 4131 ntBASIC5.71□□□□□ -1.5
RNF40O75150 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 AL672167.1-204ENST00000641875 3017 ntBASIC5.71□□□□□ -1.5
RNF40O75150 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 ZNF204P-201ENST00000416749 2397 ntBASIC5.71□□□□□ -1.5
RNF40O75150 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF40O75150 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF40O75150 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF40O75150 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF40O75150 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF40O75150 U8.4-201ENST00000363626 134 ntBASIC5.7□□□□□ -1.5
RNF40O75150 RNU6-1286P-201ENST00000383871 107 ntBASIC5.7□□□□□ -1.5
RNF40O75150 RNU6-281P-201ENST00000384212 103 ntBASIC5.7□□□□□ -1.5
RNF40O75150 RNU6-1145P-201ENST00000384246 107 ntBASIC5.7□□□□□ -1.5
RNF40O75150 SNORD56.6-201ENST00000384569 71 ntBASIC5.7□□□□□ -1.5
RNF40O75150 Y_RNA.542-201ENST00000384641 111 ntBASIC5.7□□□□□ -1.5
RNF40O75150 MIR329-1-201ENST00000385028 80 ntBASIC5.7□□□□□ -1.5
RNF40O75150 SNORA40.19-201ENST00000390846 128 ntBASIC5.7□□□□□ -1.5
RNF40O75150 RN7SKP125-201ENST00000410481 302 ntBASIC5.7□□□□□ -1.5
RNF40O75150 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF40O75150 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF40O75150 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF40O75150 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF40O75150 RPL7AP6-201ENST00000477943 801 ntBASIC5.7□□□□□ -1.5
RNF40O75150 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF40O75150 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RNF40O75150 RNA5SP165-201ENST00000517142 115 ntBASIC5.7□□□□□ -1.5
RNF40O75150 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF40O75150 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF40O75150 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF40O75150 DNAJC19P2-201ENST00000593340 302 ntBASIC5.7□□□□□ -1.5
RNF40O75150 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF40O75150 AC068870.2-201ENST00000620635 389 ntBASIC5.7□□□□□ -1.5
RNF40O75150 MIR3658-201ENST00000636291 56 ntBASIC5.7□□□□□ -1.5
RNF40O75150 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF40O75150 AC008568.2-201ENST00000623862 2313 ntBASIC5.7□□□□□ -1.5
RNF40O75150 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF40O75150 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms