Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.98□□□□□ -2.09
SHOX2O60902 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.98□□□□□ -2.09
SHOX2O60902 AC034222.1-201ENST00000494052 532 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC008628.1-201ENST00000508663 265 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.98□□□□□ -2.09
SHOX2O60902 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.98□□□□□ -2.09
SHOX2O60902 AL359212.1-201ENST00000556608 614 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.98□□□□□ -2.09
SHOX2O60902 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 SNORD14A-201ENST00000606526 91 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 snoU13.31-201ENST00000607291 104 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC120053.1-201ENST00000607706 736 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AL391813.2-201ENST00000609113 322 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHOX2O60902 AL445264.1-201ENST00000621719 171 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC009268.2-201ENST00000621925 457 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 AC068880.4-201ENST00000623082 495 ntBASIC1.98□□□□□ -2.09
SHOX2O60902 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHOX2O60902 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHOX2O60902 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SHOX2O60902 RNU6-884P-201ENST00000363889 107 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 SNORA3A-201ENST00000364113 130 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 Y_RNA.374-201ENST00000365606 101 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 CCNG1P1-201ENST00000406783 885 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 USP9YP19-201ENST00000412165 485 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 USP9YP13-201ENST00000417797 480 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC027124.2-201ENST00000428249 105 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.97□□□□□ -2.09
SHOX2O60902 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 AC002381.1-201ENST00000447049 280 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.97□□□□□ -2.09
SHOX2O60902 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHOX2O60902 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 HMGB1P28-201ENST00000507778 552 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC098591.2-201ENST00000510152 315 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 RNU6-714P-201ENST00000516963 103 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 AP005902.1-201ENST00000521358 186 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHOX2O60902 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.97□□□□□ -2.09
SHOX2O60902 AC005951.2-201ENST00000576282 495 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.97□□□□□ -2.09
SHOX2O60902 AC005776.1-201ENST00000603164 290 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC007938.3-201ENST00000604965 623 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 MTND4LP5-201ENST00000605152 292 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC239868.4-201ENST00000608318 671 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AP002791.1-201ENST00000623291 381 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 AC073592.7-201ENST00000623659 507 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.97□□□□□ -2.09
SHOX2O60902 MTND5P6-201ENST00000422338 1798 ntBASIC1.97□□□□□ -2.09
SHOX2O60902 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHOX2O60902 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
SHOX2O60902 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHOX2O60902 AP005901.5-201ENST00000545779 1796 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 SNORD114-26-201ENST00000363543 72 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 SNORA23-201ENST00000365128 182 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 BTF3P7-201ENST00000407097 488 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 RNU6-1328P-201ENST00000410938 106 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 NDUFS5P4-201ENST00000412983 318 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AL451054.2-201ENST00000420896 202 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC007435.1-201ENST00000421086 415 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 MED14P1-201ENST00000430517 648 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 PTGES3P1-201ENST00000439531 483 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC098831.1-201ENST00000440661 216 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.96□□□□□ -2.1
SHOX2O60902 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
SHOX2O60902 HIGD1AP2-201ENST00000446367 280 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHOX2O60902 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.96□□□□□ -2.1
SHOX2O60902 MTATP6P7-201ENST00000453315 681 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 RN7SKP210-201ENST00000459176 261 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.96□□□□□ -2.1
SHOX2O60902 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SHOX2O60902 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.96□□□□□ -2.1
SHOX2O60902 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.96□□□□□ -2.1
SHOX2O60902 RNU6-583P-201ENST00000516012 92 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 RNU6-1225P-201ENST00000516336 65 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 DEFB130C-202ENST00000530001 230 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.96□□□□□ -2.1
SHOX2O60902 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC025588.2-201ENST00000604851 466 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC126118.1-201ENST00000607744 628 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AL138478.1-201ENST00000612252 832 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC024257.5-201ENST00000612739 531 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AL512506.1-201ENST00000613918 449 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
SHOX2O60902 AL079343.1-201ENST00000572358 1771 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 AC110491.1-201ENST00000562191 2010 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 AC121333.1-201ENST00000567488 2709 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 RNU6-97P-201ENST00000363387 104 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 Y_RNA.178-201ENST00000363832 102 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 RNU1-91P-201ENST00000364746 163 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 MTND1P21-201ENST00000412991 285 ntBASIC1.95□□□□□ -2.1
SHOX2O60902 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms