Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SDR42E1P2-201ENST00000614861 481 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AL355365.1-201ENST00000616480 294 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AC010378.1-201ENST00000619270 362 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AL078596.1-201ENST00000624856 447 ntBASIC4.9□□□□□ -1.63
GRIN3BO60391 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.9□□□□□ -1.63
GRIN3BO60391 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
GRIN3BO60391 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
GRIN3BO60391 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIN3BO60391 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 AC090337.1-201ENST00000579651 2074 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 U1.1-201ENST00000384101 164 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 RNU6-301P-201ENST00000384277 107 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 RNU6-14P-201ENST00000384630 106 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 MIR195-201ENST00000385194 87 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 AL583834.1-201ENST00000406943 343 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 RNA5SP111-201ENST00000411386 101 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 RPL7AP73-201ENST00000413490 353 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIN3BO60391 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.89□□□□□ -1.63
GRIN3BO60391 RPL7P28-201ENST00000437739 740 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.89□□□□□ -1.63
GRIN3BO60391 RPL30P15-201ENST00000457129 321 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 MTND5P22-201ENST00000458380 195 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 DEFB109F-201ENST00000491870 277 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 RNU6-1016P-201ENST00000516689 94 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 AC090151.1-201ENST00000520784 730 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIN3BO60391 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.89□□□□□ -1.63
GRIN3BO60391 AC126177.3-201ENST00000551839 688 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.89□□□□□ -1.63
GRIN3BO60391 AL158032.1-201ENST00000605401 106 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 AP000654.2-201ENST00000605633 586 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.89□□□□□ -1.63
GRIN3BO60391 EOGT-210ENST00000615922 1931 ntBASIC4.89□□□□□ -1.63
GRIN3BO60391 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.89□□□□□ -1.63
GRIN3BO60391 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GRIN3BO60391 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
GRIN3BO60391 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
GRIN3BO60391 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.88□□□□□ -1.63
GRIN3BO60391 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.88□□□□□ -1.63
GRIN3BO60391 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
GRIN3BO60391 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 RNU6-310P-201ENST00000384655 107 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 CISD1P1-201ENST00000393907 327 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 RN7SKP167-201ENST00000411047 285 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.88□□□□□ -1.63
GRIN3BO60391 CBX3P6-201ENST00000430257 527 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 TXNP1-201ENST00000441872 371 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.88□□□□□ -1.63
GRIN3BO60391 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 RNU6-953P-201ENST00000459154 107 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.88□□□□□ -1.63
GRIN3BO60391 AC007991.1-201ENST00000522680 631 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.88□□□□□ -1.63
GRIN3BO60391 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.88□□□□□ -1.63
GRIN3BO60391 MIR4458-201ENST00000578872 75 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 MIR3149-201ENST00000584629 83 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 AC022418.1-201ENST00000624118 445 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 AL669831.3-213ENST00000636676 183 ntBASIC4.88□□□□□ -1.63
GRIN3BO60391 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
GRIN3BO60391 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
GRIN3BO60391 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.88□□□□□ -1.63
GRIN3BO60391 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GRIN3BO60391 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.87□□□□□ -1.63
GRIN3BO60391 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.87□□□□□ -1.63
GRIN3BO60391 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GRIN3BO60391 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.87□□□□□ -1.63
GRIN3BO60391 SNORD3E-201ENST00000362899 217 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU6-1040P-201ENST00000383974 107 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU6-1026P-201ENST00000384465 108 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU4-70P-201ENST00000384579 139 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU6-882P-201ENST00000391025 103 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU2-3P-201ENST00000410144 191 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.87□□□□□ -1.63
GRIN3BO60391 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.87□□□□□ -1.63
GRIN3BO60391 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.87□□□□□ -1.63
GRIN3BO60391 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.87□□□□□ -1.63
GRIN3BO60391 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.87□□□□□ -1.63
GRIN3BO60391 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.87□□□□□ -1.63
GRIN3BO60391 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.87□□□□□ -1.63
GRIN3BO60391 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.87□□□□□ -1.63
GRIN3BO60391 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.87□□□□□ -1.63
GRIN3BO60391 RNU4-60P-201ENST00000517239 135 ntBASIC4.87□□□□□ -1.63
GRIN3BO60391 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms