Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM2O43300 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM2O43300 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRRTM2O43300 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 SNORA75-201ENST00000384158 137 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.69□□□□□ -1.98
LRRTM2O43300 Z85995.1-201ENST00000415547 335 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 SEPT2P1-201ENST00000419651 180 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 VN1R108P-201ENST00000431580 830 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 RPS20P5-201ENST00000434808 360 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 USP9YP29-201ENST00000445112 563 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC009961.3-201ENST00000449832 765 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 EEF1B2P7-201ENST00000451177 676 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AL109933.2-201ENST00000452651 260 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 MTCO2P18-201ENST00000457151 658 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 SNORD42A-201ENST00000459584 64 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 RPL31P41-201ENST00000477967 372 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AL135752.1-201ENST00000479477 471 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 RPL23AP70-201ENST00000483361 460 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 RPL23AP41-201ENST00000484754 458 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AC098799.2-201ENST00000509466 868 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 TTC39CP1-201ENST00000512513 755 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 MTND5P13-201ENST00000513046 1079 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 Y_RNA.695-201ENST00000516715 107 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AP003181.2-201ENST00000528941 181 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRTM2O43300 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRTM2O43300 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AC124947.2-202ENST00000552735 133 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.69□□□□□ -1.98
LRRTM2O43300 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC009977.1-201ENST00000586015 570 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 RSL24D1P11-201ENST00000591045 491 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC073544.2-201ENST00000601155 540 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AL451064.1-201ENST00000607718 471 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 AC007038.2-201ENST00000608095 740 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LRRTM2O43300 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
LRRTM2O43300 AL049641.1-201ENST00000441055 1948 ntBASIC2.69□□□□□ -1.98
LRRTM2O43300 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRRTM2O43300 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.69□□□□□ -1.98
LRRTM2O43300 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRTM2O43300 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRRTM2O43300 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRRTM2O43300 Y_RNA.51-201ENST00000362725 102 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 SNORA23-201ENST00000365128 182 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 SET-203ENST00000372688 801 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRTM2O43300 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRRTM2O43300 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRRTM2O43300 RNU1-39P-201ENST00000383897 165 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 RNY3P10-201ENST00000384764 102 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 MIR514A1-201ENST00000385133 98 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AL109755.1-201ENST00000401791 649 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AL590004.2-201ENST00000404787 371 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 Y_RNA.598-201ENST00000410480 95 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 HMGN1P14-201ENST00000412459 517 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 RPL35AP22-201ENST00000436855 335 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRTM2O43300 MTND6P13-201ENST00000443510 523 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 RPL39P40-201ENST00000445481 146 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 RPL37P4-201ENST00000448908 268 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 RNU7-59P-201ENST00000459101 61 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 RPS15AP34-201ENST00000487776 387 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRRTM2O43300 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AC114781.4-201ENST00000513707 639 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 SCARNA15.2-201ENST00000516409 127 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.68□□□□□ -1.98
LRRTM2O43300 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRTM2O43300 MIR3146-201ENST00000580367 79 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.68□□□□□ -1.98
LRRTM2O43300 AC068790.3-201ENST00000602988 553 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC004908.2-201ENST00000609090 574 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC245517.5-201ENST00000611529 162 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 AC107871.2-201ENST00000612894 502 ntBASIC2.68□□□□□ -1.98
LRRTM2O43300 uc_338.12-201ENST00000616344 181 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms