Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR323A-201ENST00000362199 86 ntBASIC8.47□□□□□ -1.05
MSH5O43196 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.47□□□□□ -1.05
MSH5O43196 AL353813.1-201ENST00000440700 253 ntBASIC8.47□□□□□ -1.05
MSH5O43196 AC090525.1-201ENST00000479116 478 ntBASIC8.47□□□□□ -1.05
MSH5O43196 AC018645.1-201ENST00000505003 109 ntBASIC8.47□□□□□ -1.05
MSH5O43196 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.47□□□□□ -1.05
MSH5O43196 MIR2681-201ENST00000581814 105 ntBASIC8.47□□□□□ -1.05
MSH5O43196 Y_RNA.773-201ENST00000607168 90 ntBASIC8.47□□□□□ -1.05
MSH5O43196 MIR6768-201ENST00000610734 72 ntBASIC8.47□□□□□ -1.05
MSH5O43196 MIR6811-201ENST00000620409 58 ntBASIC8.47□□□□□ -1.05
MSH5O43196 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.47□□□□□ -1.05
MSH5O43196 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
MSH5O43196 AC058791.1-201ENST00000608412 3198 ntBASIC8.47□□□□□ -1.05
MSH5O43196 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
MSH5O43196 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.47□□□□□ -1.05
MSH5O43196 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
MSH5O43196 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
MSH5O43196 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
MSH5O43196 AC005336.3-201ENST00000623833 2679 ntBASIC8.47□□□□□ -1.05
MSH5O43196 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
MSH5O43196 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.46□□□□□ -1.05
MSH5O43196 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.46□□□□□ -1.05
MSH5O43196 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
MSH5O43196 AC100757.1-201ENST00000616872 1835 ntBASIC8.46□□□□□ -1.06
MSH5O43196 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC8.46□□□□□ -1.06
MSH5O43196 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH5O43196 MIR514A1-201ENST00000385133 98 ntBASIC8.46□□□□□ -1.06
MSH5O43196 RNU6-129P-201ENST00000391022 107 ntBASIC8.46□□□□□ -1.06
MSH5O43196 MYL6P5-201ENST00000412707 459 ntBASIC8.46□□□□□ -1.06
MSH5O43196 AL035398.1-201ENST00000430869 322 ntBASIC8.46□□□□□ -1.06
MSH5O43196 GEMIN8P3-201ENST00000445417 720 ntBASIC8.46□□□□□ -1.06
MSH5O43196 RPL27AP5-201ENST00000469428 449 ntBASIC8.46□□□□□ -1.06
MSH5O43196 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.46□□□□□ -1.06
MSH5O43196 AC008507.3-201ENST00000585753 472 ntBASIC8.46□□□□□ -1.06
MSH5O43196 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
MSH5O43196 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
MSH5O43196 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.06
MSH5O43196 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
MSH5O43196 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC8.45□□□□□ -1.06
MSH5O43196 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
MSH5O43196 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
MSH5O43196 SNORD61-201ENST00000384252 73 ntBASIC8.45□□□□□ -1.06
MSH5O43196 MIR562-201ENST00000384894 95 ntBASIC8.45□□□□□ -1.06
MSH5O43196 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
MSH5O43196 RNU6-750P-201ENST00000390946 107 ntBASIC8.45□□□□□ -1.06
MSH5O43196 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
MSH5O43196 RN7SL284P-201ENST00000498823 275 ntBASIC8.45□□□□□ -1.06
MSH5O43196 SNORA58-201ENST00000505219 137 ntBASIC8.45□□□□□ -1.06
MSH5O43196 AC021006.3-201ENST00000530771 192 ntBASIC8.45□□□□□ -1.06
MSH5O43196 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.45□□□□□ -1.06
MSH5O43196 MIR4420-201ENST00000583944 77 ntBASIC8.45□□□□□ -1.06
MSH5O43196 AP005432.2-201ENST00000608162 586 ntBASIC8.45□□□□□ -1.06
MSH5O43196 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.45□□□□□ -1.06
MSH5O43196 AL354718.1-201ENST00000619764 589 ntBASIC8.45□□□□□ -1.06
MSH5O43196 MIR376A2-201ENST00000636782 80 ntBASIC8.45□□□□□ -1.06
MSH5O43196 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
MSH5O43196 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.44□□□□□ -1.06
MSH5O43196 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 AL672167.1-204ENST00000641875 3017 ntBASIC8.44□□□□□ -1.06
MSH5O43196 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
MSH5O43196 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.44□□□□□ -1.06
MSH5O43196 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 RNU1-96P-201ENST00000364163 162 ntBASIC8.44□□□□□ -1.06
MSH5O43196 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC8.44□□□□□ -1.06
MSH5O43196 AL929472.1-201ENST00000417484 429 ntBASIC8.44□□□□□ -1.06
MSH5O43196 NXT1P1-201ENST00000458481 316 ntBASIC8.44□□□□□ -1.06
MSH5O43196 RN7SL807P-201ENST00000470923 297 ntBASIC8.44□□□□□ -1.06
MSH5O43196 RPL12P30-201ENST00000488389 499 ntBASIC8.44□□□□□ -1.06
MSH5O43196 AC007686.1-201ENST00000488511 463 ntBASIC8.44□□□□□ -1.06
MSH5O43196 HMSD-204ENST00000526932 162 ntTSL 3 BASIC8.44□□□□□ -1.06
MSH5O43196 MRPS21P8-201ENST00000569196 235 ntBASIC8.44□□□□□ -1.06
MSH5O43196 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC8.44□□□□□ -1.06
MSH5O43196 U1.41-201ENST00000617626 165 ntBASIC8.44□□□□□ -1.06
MSH5O43196 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC8.44□□□□□ -1.06
MSH5O43196 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
MSH5O43196 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
MSH5O43196 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.44□□□□□ -1.06
MSH5O43196 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC8.44□□□□□ -1.06
MSH5O43196 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
MSH5O43196 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.43□□□□□ -1.06
MSH5O43196 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
MSH5O43196 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
MSH5O43196 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC8.43□□□□□ -1.06
MSH5O43196 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.43□□□□□ -1.06
MSH5O43196 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.43□□□□□ -1.06
MSH5O43196 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
MSH5O43196 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
MSH5O43196 RNU6-478P-201ENST00000363904 110 ntBASIC8.43□□□□□ -1.06
MSH5O43196 Y_RNA.203-201ENST00000364106 102 ntBASIC8.43□□□□□ -1.06
MSH5O43196 RNU6-1280P-201ENST00000365211 107 ntBASIC8.43□□□□□ -1.06
MSH5O43196 MIR519C-201ENST00000385053 87 ntBASIC8.43□□□□□ -1.06
MSH5O43196 AL031121.1-201ENST00000406553 254 ntBASIC8.43□□□□□ -1.06
MSH5O43196 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC8.43□□□□□ -1.06
MSH5O43196 AC080013.2-201ENST00000460866 323 ntBASIC8.43□□□□□ -1.06
MSH5O43196 RN7SL369P-201ENST00000477138 299 ntBASIC8.43□□□□□ -1.06
MSH5O43196 RNU6-581P-201ENST00000516214 105 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms