Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 MTND1P21-201ENST00000412991 285 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC098614.2-201ENST00000426040 255 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AL356583.2-201ENST00000426536 280 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.76□□□□□ -1.97
E2F3O00716 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.76□□□□□ -1.97
E2F3O00716 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.76□□□□□ -1.97
E2F3O00716 AP000936.2-201ENST00000447151 681 ntBASIC2.76□□□□□ -1.97
E2F3O00716 USP9YP12-201ENST00000450481 570 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AL122001.1-201ENST00000457027 370 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
E2F3O00716 SUMO2P6-201ENST00000505273 288 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC113155.1-201ENST00000511141 769 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
E2F3O00716 Y_RNA.695-201ENST00000516715 107 ntBASIC2.76□□□□□ -1.97
E2F3O00716 RNU6-1003P-201ENST00000517099 105 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.76□□□□□ -1.97
E2F3O00716 SUB1P1-201ENST00000524415 382 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
E2F3O00716 GLYCAM1-201ENST00000546596 285 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.76□□□□□ -1.97
E2F3O00716 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.76□□□□□ -1.97
E2F3O00716 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.76□□□□□ -1.97
E2F3O00716 OR1M4P-201ENST00000589199 287 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC002545.1-201ENST00000592511 181 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AL158063.1-201ENST00000615349 536 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC048344.4-201ENST00000619744 527 ntBASIC2.76□□□□□ -1.97
E2F3O00716 FO624990.1-201ENST00000636373 85 ntBASIC2.76□□□□□ -1.97
E2F3O00716 AC092593.1-201ENST00000515413 1815 ntBASIC2.76□□□□□ -1.97
E2F3O00716 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
E2F3O00716 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
E2F3O00716 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
E2F3O00716 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
E2F3O00716 Y_RNA.46-201ENST00000362695 102 ntBASIC2.75□□□□□ -1.97
E2F3O00716 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
E2F3O00716 RNU6-278P-201ENST00000390945 109 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC078974.1-201ENST00000411597 223 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.75□□□□□ -1.97
E2F3O00716 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.75□□□□□ -1.97
E2F3O00716 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.75□□□□□ -1.97
E2F3O00716 RPL35AP22-201ENST00000436855 335 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
E2F3O00716 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
E2F3O00716 TPT1P14-201ENST00000448018 505 ntBASIC2.75□□□□□ -1.97
E2F3O00716 NIPA2P5-201ENST00000452282 464 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC105313.1-201ENST00000509121 353 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.75□□□□□ -1.97
E2F3O00716 AC008716.1-201ENST00000511084 513 ntBASIC2.75□□□□□ -1.97
E2F3O00716 RNA5SP76-201ENST00000516277 87 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
E2F3O00716 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.75□□□□□ -1.97
E2F3O00716 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.75□□□□□ -1.97
E2F3O00716 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.75□□□□□ -1.97
E2F3O00716 MIR4319-201ENST00000577285 85 ntBASIC2.75□□□□□ -1.97
E2F3O00716 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
E2F3O00716 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
E2F3O00716 HMGN2P15-201ENST00000585707 270 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC013412.1-201ENST00000610687 192 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC010133.1-201ENST00000615809 842 ntBASIC2.75□□□□□ -1.97
E2F3O00716 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
E2F3O00716 MTND1P37-201ENST00000636562 264 ntBASIC2.75□□□□□ -1.97
E2F3O00716 AC010149.2-201ENST00000637608 315 ntBASIC2.75□□□□□ -1.97
E2F3O00716 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
E2F3O00716 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.74□□□□□ -1.97
E2F3O00716 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
E2F3O00716 Y_RNA.77-201ENST00000362962 107 ntBASIC2.74□□□□□ -1.97
E2F3O00716 RNU4-40P-201ENST00000364351 143 ntBASIC2.74□□□□□ -1.97
E2F3O00716 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
E2F3O00716 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
E2F3O00716 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
E2F3O00716 TXNP7-201ENST00000406296 293 ntBASIC2.74□□□□□ -1.97
E2F3O00716 Y_RNA.598-201ENST00000410480 95 ntBASIC2.74□□□□□ -1.97
E2F3O00716 RN7SKP142-201ENST00000411236 328 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AL513331.1-201ENST00000411908 397 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AL451054.2-201ENST00000420896 202 ntBASIC2.74□□□□□ -1.97
E2F3O00716 SUMO1P4-201ENST00000429430 302 ntBASIC2.74□□□□□ -1.97
E2F3O00716 MTCO2P16-201ENST00000436962 677 ntBASIC2.74□□□□□ -1.97
E2F3O00716 MTND4P32-201ENST00000437189 1237 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AL513043.1-201ENST00000439124 535 ntBASIC2.74□□□□□ -1.97
E2F3O00716 RPS15AP7-201ENST00000439294 405 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.74□□□□□ -1.97
E2F3O00716 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.74□□□□□ -1.97
E2F3O00716 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.74□□□□□ -1.97
E2F3O00716 RPL23AP41-201ENST00000484754 458 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AC055855.1-201ENST00000489563 579 ntBASIC2.74□□□□□ -1.97
E2F3O00716 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
E2F3O00716 AC135721.1-201ENST00000497954 479 ntBASIC2.74□□□□□ -1.97
E2F3O00716 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.74□□□□□ -1.97
E2F3O00716 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.74□□□□□ -1.97
E2F3O00716 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.74□□□□□ -1.97
E2F3O00716 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.74□□□□□ -1.97
E2F3O00716 SCGB1D5P-201ENST00000515134 247 ntBASIC2.74□□□□□ -1.97
E2F3O00716 RN7SKP132-201ENST00000516001 208 ntBASIC2.74□□□□□ -1.97
E2F3O00716 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
E2F3O00716 RNA5SP367-201ENST00000516557 118 ntBASIC2.74□□□□□ -1.97
E2F3O00716 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.74□□□□□ -1.97
E2F3O00716 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
E2F3O00716 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms