Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 SUMO1P1-201ENST00000497904 306 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
HMGN4O00479 AC098591.2-201ENST00000510152 315 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 RNU5A-7P-201ENST00000515979 116 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 SNORA31.6-201ENST00000516241 130 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.88□□□□□ -2.27
HMGN4O00479 AC104984.5-201ENST00000586878 94 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AC013553.2-201ENST00000604244 589 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AP001485.1-201ENST00000604799 199 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AL589743.7-201ENST00000612637 233 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AP005212.4-201ENST00000614206 710 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AC090772.4-201ENST00000623599 362 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AL109659.3-201ENST00000624985 950 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMGN4O00479 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.87□□□□□ -2.27
HMGN4O00479 RNU6-338P-201ENST00000383888 105 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 SNORA22-201ENST00000383907 134 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 SNORA22C-201ENST00000384614 134 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 U6atac.2-201ENST00000408644 118 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN4O00479 AL590383.1-201ENST00000428602 75 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AC024082.2-201ENST00000434771 238 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 RPS15AP5-201ENST00000436276 388 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HMGN4O00479 AL049734.2-201ENST00000441066 616 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 HMGB1P35-201ENST00000503360 598 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AC138853.1-201ENST00000503549 823 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 FAM206BP-201ENST00000510179 541 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN4O00479 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGN4O00479 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMGN4O00479 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.87□□□□□ -2.27
HMGN4O00479 AC233702.2-202ENST00000562547 291 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AC105245.1-201ENST00000581934 244 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.87□□□□□ -2.27
HMGN4O00479 snoU13.31-201ENST00000607291 104 ntBASIC0.87□□□□□ -2.27
HMGN4O00479 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HMGN4O00479 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMGN4O00479 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
HMGN4O00479 BTF3L4P2-201ENST00000392798 346 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 FGF7P8-201ENST00000402994 292 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 NDUFS5P1-201ENST00000405668 289 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 RNU6-272P-201ENST00000411028 104 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.86□□□□□ -2.27
HMGN4O00479 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN4O00479 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC092393.1-201ENST00000439625 742 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 RAB11AP1-201ENST00000442978 646 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 COX6CP14-201ENST00000469580 174 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN4O00479 AL163540.1-201ENST00000485382 386 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 RNU6-991P-201ENST00000516168 107 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGN4O00479 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC022202.1-201ENST00000613515 211 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HMGN4O00479 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
HMGN4O00479 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.86□□□□□ -2.27
HMGN4O00479 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.86□□□□□ -2.27
HMGN4O00479 ZNF29P-201ENST00000225587 168 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 RNU1-22P-201ENST00000363334 158 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
HMGN4O00479 SNORD26-201ENST00000384147 75 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 RNU6-1151P-201ENST00000384684 107 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC096649.2-201ENST00000416186 393 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 NDUFB4P7-201ENST00000423198 363 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.85□□□□□ -2.27
HMGN4O00479 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC117503.1-201ENST00000472241 394 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.85□□□□□ -2.27
HMGN4O00479 RNA5SP458-201ENST00000516188 119 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 RNU6-362P-201ENST00000516736 90 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.85□□□□□ -2.27
HMGN4O00479 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN4O00479 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN4O00479 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.85□□□□□ -2.27
HMGN4O00479 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN4O00479 MIR4769-201ENST00000584126 77 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC015688.2-201ENST00000584523 262 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AL031274.2-201ENST00000599419 203 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC123912.5-201ENST00000605470 343 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AL138478.1-201ENST00000612252 832 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 FRG1HP-204ENST00000617940 757 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 AC092192.1-201ENST00000633154 1018 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 Z99571.1-201ENST00000636677 394 ntBASIC0.85□□□□□ -2.27
HMGN4O00479 MIR26B-201ENST00000362251 77 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 RNU6-386P-201ENST00000362650 107 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 MIR649-201ENST00000384843 97 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 MIR518A2-201ENST00000384966 87 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 RNU6-516P-201ENST00000411381 104 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms