Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC004805.2-201ENST00000605382 482 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC131235.4-201ENST00000609288 620 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC245297.2-201ENST00000610119 565 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
UPK1AO00322 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AL136981.2-201ENST00000617319 734 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AP002791.1-201ENST00000623291 381 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 MIR3199-2-201ENST00000636243 86 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UPK1AO00322 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UPK1AO00322 AC010889.1-201ENST00000566193 2666 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1AO00322 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
UPK1AO00322 RNU6-853P-201ENST00000364306 107 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.86□□□□□ -2.11
UPK1AO00322 NDUFS5P4-201ENST00000412983 318 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1AO00322 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1AO00322 TPT1P14-201ENST00000448018 505 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC013267.1-201ENST00000458227 267 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC023141.11-201ENST00000508864 202 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.86□□□□□ -2.11
UPK1AO00322 AL049838.1-201ENST00000563647 981 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC007151.1-201ENST00000572774 483 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1AO00322 MIR3199-1-201ENST00000582434 88 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.86□□□□□ -2.11
UPK1AO00322 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1AO00322 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.86□□□□□ -2.11
UPK1AO00322 AL121895.2-201ENST00000619558 447 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 YWHAEP7-203ENST00000622054 312 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC012640.5-201ENST00000623897 319 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 AC116618.1-201ENST00000634617 774 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UPK1AO00322 AC110491.1-201ENST00000562191 2010 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.86□□□□□ -2.11
UPK1AO00322 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
UPK1AO00322 MIR320C1-201ENST00000408566 88 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 RN7SKP192-201ENST00000411291 327 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1AO00322 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 BPY2DP-201ENST00000422208 265 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1AO00322 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 USP12PX-201ENST00000432383 1057 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 IPO7P1-201ENST00000442031 636 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 AC034222.1-201ENST00000494052 532 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC106872.3-201ENST00000495104 446 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1AO00322 AC096571.1-202ENST00000506634 735 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 AC079395.1-201ENST00000510981 262 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 AL138976.2-201ENST00000563989 694 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC135628.1-201ENST00000568867 534 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.85□□□□□ -2.11
UPK1AO00322 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1AO00322 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 AL133445.2-201ENST00000611191 527 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC005332.10-201ENST00000612725 619 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 AC098657.3-201ENST00000620434 263 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.85□□□□□ -2.11
UPK1AO00322 PCMTD1P7-201ENST00000634506 357 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1AO00322 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1AO00322 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
UPK1AO00322 AL109809.4-201ENST00000603520 2185 ntBASIC1.85□□□□□ -2.11
UPK1AO00322 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.85□□□□□ -2.11
UPK1AO00322 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
UPK1AO00322 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1AO00322 RNU6-621P-201ENST00000364752 109 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 RPL21P24-201ENST00000413752 448 ntBASIC1.84□□□□□ -2.11
UPK1AO00322 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms