Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 5S_rRNA.1-201ENST00000364415 116 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 Z93242.1-201ENST00000427102 353 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 snoU13.9-201ENST00000458927 103 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 RPS23P4-201ENST00000487908 423 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU6-250P-201ENST00000516958 103 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 OR5B19P-201ENST00000531766 928 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC012414.6-201ENST00000568241 401 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC034105.4-201ENST00000568304 277 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 AP003485.1-201ENST00000625093 753 ntBASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CHKB-CPT1BH3BT56 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU6-1339P-201ENST00000363574 91 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU4-91P-201ENST00000364778 135 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR937-201ENST00000401271 86 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU2-33P-201ENST00000410344 192 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 OR6C66P-201ENST00000414917 930 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 BTF3P4-201ENST00000418852 495 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AL121594.1-201ENST00000475906 575 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC109927.2-201ENST00000506416 303 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 CYB5AP5-201ENST00000549779 389 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AL132857.1-201ENST00000555180 708 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LARP7P3-201ENST00000579888 337 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC005261.5-201ENST00000596280 355 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC013244.2-201ENST00000603396 103 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 TUG1_1.1-201ENST00000610654 145 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AL121890.5-201ENST00000620848 304 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 AC090517.3-201ENST00000625170 141 ntBASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.62□□□□□ -2.31
CHKB-CPT1BH3BT56 RBBP8P1-201ENST00000449447 1844 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 ENSAP3-201ENST00000312710 333 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR513A1-201ENST00000385138 129 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AL591034.2-201ENST00000402839 359 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 NDUFS5P4-201ENST00000412983 318 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 MTCO2P20-201ENST00000437339 673 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 KATNBL1P6-201ENST00000453433 915 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU1-123P-201ENST00000458950 160 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC008481.1-201ENST00000463278 396 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC006512.1-201ENST00000468816 291 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 RPS26P55-201ENST00000471178 356 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC018437.1-201ENST00000492214 406 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 SNORA67.7-201ENST00000516664 135 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC091152.3-201ENST00000604227 325 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC239803.2-201ENST00000610161 430 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC135507.2-201ENST00000612443 309 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR3199-2-201ENST00000636243 86 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 GDI2P1-201ENST00000429312 1336 ntBASIC0.61□□□□□ -2.31
CHKB-CPT1BH3BT56 AC092881.1-201ENST00000638218 2733 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RNU1-57P-201ENST00000384491 166 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 MIR504-201ENST00000385065 83 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 TXNP7-201ENST00000406296 293 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP100-201ENST00000410903 110 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RNA5SP59-201ENST00000410922 110 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 RPS27P16-201ENST00000425758 201 ntBASIC0.6□□□□□ -2.31
CHKB-CPT1BH3BT56 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms