Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC007842.1-201ENST00000597336 2039 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF223E7ERA6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 RNA5SP319-201ENST00000362768 119 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 Y_RNA.220-201ENST00000364244 109 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 U1.1-201ENST00000384101 164 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 SNORA72-201ENST00000384339 132 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 RNU6-1113P-201ENST00000384348 107 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 MIR223-201ENST00000385204 110 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 MIR1278-201ENST00000408753 81 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 RPL27AP8-201ENST00000424277 446 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC113412.1-201ENST00000425840 504 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AL691449.1-201ENST00000426570 421 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 GLUD1P3-202ENST00000508551 200 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC091868.1-201ENST00000508746 304 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC007012.1-201ENST00000567192 175 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC011471.1-201ENST00000585766 187 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC015914.2-201ENST00000618167 288 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC134878.1-201ENST00000619901 243 ntBASIC4.84□□□□□ -1.63
RNF223E7ERA6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF223E7ERA6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF223E7ERA6 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF223E7ERA6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF223E7ERA6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF223E7ERA6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RNF223E7ERA6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RNF223E7ERA6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RNF223E7ERA6 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RNF223E7ERA6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 RNA5SP507-201ENST00000363603 121 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RNA5SP125-201ENST00000364843 120 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 Y_RNA.361-201ENST00000365515 120 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RNU6-813P-201ENST00000384691 107 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RNU6-440P-201ENST00000390882 105 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 AL139148.1-201ENST00000427122 680 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 REREP2Y-201ENST00000439103 200 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 SDC4P-201ENST00000453285 601 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 ACA64.4-201ENST00000459070 127 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RN7SL172P-201ENST00000460535 303 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RPL21P10-201ENST00000463521 490 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 RN7SL51P-201ENST00000468230 285 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 AC231760.1-201ENST00000498002 260 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 AC025647.1-201ENST00000517879 253 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 AL390726.5-202ENST00000564800 256 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 AC053481.4-201ENST00000583164 216 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 MIR6748-201ENST00000610433 71 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 GTF2IP4-201ENST00000453092 2054 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 MFSD8-239ENST00000641590 2479 ntBASIC4.83□□□□□ -1.64
RNF223E7ERA6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF223E7ERA6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF223E7ERA6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 DOCK11P1-201ENST00000553480 5932 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 AC118273.1-201ENST00000525324 3006 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 ZNF658B-201ENST00000602828 3408 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 RNU6-508P-201ENST00000363231 103 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 RNA5SP211-201ENST00000365516 117 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 SNORA36B-201ENST00000410438 131 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 RNA5SP251-201ENST00000410614 137 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms