Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC008716.1-201ENST00000511084 513 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC105031.1-201ENST00000518550 476 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 RPL23AP53-201ENST00000521854 457 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AP000763.2-201ENST00000540641 163 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 MIR4325-201ENST00000583049 90 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 MIR4795-201ENST00000584182 89 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC023043.2-201ENST00000589678 1026 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AL356055.1-201ENST00000602528 446 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC091167.4-201ENST00000605079 184 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 AC128687.2-201ENST00000609657 566 ntBASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC85CA6NKD9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 SNORA5B-201ENST00000363786 132 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNA5SP51-201ENST00000364750 119 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 Y_RNA.339-201ENST00000365325 102 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU6-395P-201ENST00000365662 106 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU2-37P-201ENST00000410695 177 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU6-607P-201ENST00000411283 108 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AL353621.1-201ENST00000418219 243 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC092047.1-201ENST00000424997 240 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 MYL8P-204ENST00000431574 518 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 GPM6BP2-201ENST00000432046 144 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 HMGB1P12-201ENST00000438594 598 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 GPM6BP1-201ENST00000446387 144 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 SNRPGP5-201ENST00000456003 220 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU2-58P-201ENST00000516403 183 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNU6-256P-201ENST00000516747 97 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RNA5SP290-201ENST00000517133 127 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC087369.1-201ENST00000520775 996 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 MIR4672-201ENST00000583126 81 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 MIR3936-201ENST00000584304 110 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 MIR5692C1-201ENST00000585309 91 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RPL12P50-201ENST00000603116 116 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AL160290.3-201ENST00000604869 165 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AL110115.1-201ENST00000614396 364 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AL355365.1-201ENST00000616480 294 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 RMST_4.1-201ENST00000616886 107 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC002546.1-201ENST00000588041 2504 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AC007656.2-201ENST00000624902 4547 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 AP001486.2-201ENST00000561652 5113 ntBASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC85CA6NKD9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 EOGT-210ENST00000615922 1931 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MIR493-201ENST00000385254 89 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 RPL21P90-201ENST00000415692 466 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 RPL23AP25-201ENST00000430973 463 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 HMGN2P16-201ENST00000456802 261 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 RPL7P43-201ENST00000478876 753 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC022493.1-201ENST00000492984 337 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC026784.1-201ENST00000507986 352 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 SNORA25.17-201ENST00000517184 124 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC091516.1-201ENST00000549191 703 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 CYCSP40-201ENST00000575927 294 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC127024.5-201ENST00000580085 462 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MIR3672-201ENST00000584290 82 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MIR5684-201ENST00000585074 65 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC113139.1-201ENST00000605049 239 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC103710.3-201ENST00000608157 948 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 DUSP12P1-201ENST00000612874 516 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AL162274.2-201ENST00000614406 332 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 MIR1302-1-201ENST00000637932 143 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 SCN1A-220ENST00000641603 12506 ntBASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC85CA6NKD9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC85CA6NKD9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms