Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC78A2IDD5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC78A2IDD5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.259-201ENST00000364619 101 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNU6-817P-201ENST00000391083 104 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AL360182.1-201ENST00000397433 468 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 MIR548K-201ENST00000408406 116 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RN7SKP202-201ENST00000410439 330 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC018630.2-202ENST00000422992 927 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RPL7P2-201ENST00000427639 268 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 CYCSP43-201ENST00000438233 310 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RPS29P7-201ENST00000439662 171 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 Y_RNA.639-201ENST00000458981 102 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNU7-152P-201ENST00000458982 64 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RPL21P11-201ENST00000461458 483 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RPL23AP62-201ENST00000463396 453 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC012181.1-201ENST00000479895 423 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC096576.1-201ENST00000489014 359 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 TRBV12-2-201ENST00000489763 344 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 BTF3L4P4-201ENST00000506381 449 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RN7SKP13-201ENST00000515933 244 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNU6-559P-201ENST00000516151 98 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNU1-45P-201ENST00000517191 141 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC093249.1-201ENST00000567049 203 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC106782.4-201ENST00000568264 210 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 MIR4286-201ENST00000580651 93 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AL606490.9-201ENST00000603331 271 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC245389.1-201ENST00000605141 529 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AC009570.1-201ENST00000609599 745 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AL355810.1-201ENST00000614629 552 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AL450472.3-201ENST00000615578 367 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 AL133216.2-202ENST00000634512 349 ntBASIC3.88□□□□□ -1.79
CCDC78A2IDD5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC78A2IDD5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 NCAPGP1-201ENST00000505112 1814 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RNU6-50P-201ENST00000362356 103 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 SNORD42.2-201ENST00000365570 69 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RNU6-1127P-201ENST00000384580 107 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RNU6-328P-201ENST00000390887 106 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 MTCYBP4-201ENST00000401524 249 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 NDUFS5P1-201ENST00000405668 289 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RN7SKP158-201ENST00000410453 326 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AL159169.1-201ENST00000421119 127 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RPL23AP69-201ENST00000431134 458 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 HMGB1P12-201ENST00000438594 598 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 SCARNA18-201ENST00000459004 134 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RNU6-953P-201ENST00000459154 107 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC083904.1-201ENST00000487828 231 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RAC1P2-201ENST00000511164 579 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 RNU6-566P-201ENST00000516790 107 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 OR4H12P-201ENST00000556269 907 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC090877.1-201ENST00000561418 344 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC092747.3-201ENST00000603769 301 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC006133.1-201ENST00000617106 264 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AL589994.2-201ENST00000621124 579 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 AC034229.5-201ENST00000624258 185 ntBASIC3.87□□□□□ -1.79
CCDC78A2IDD5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC78A2IDD5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 RNA5SP97-201ENST00000365006 84 ntBASIC3.86□□□□□ -1.79
CCDC78A2IDD5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.86□□□□□ -1.79
CCDC78A2IDD5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms