Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR7-3-201ENST00000384898 110 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-607P-201ENST00000411283 108 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 MTCO2P27-201ENST00000420740 428 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 TOMM20P4-201ENST00000427861 435 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SNAP23P1-201ENST00000433229 246 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SNRPEP9-201ENST00000436794 238 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SETP5-201ENST00000437270 562 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SSXP4-201ENST00000451349 245 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AL583843.1-201ENST00000456070 346 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 RPL30P5-201ENST00000494923 336 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 OR1M4P-201ENST00000589199 287 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC099506.2-201ENST00000623074 221 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 AC011266.1-201ENST00000624119 3569 ntBASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC163A0A0D9SF12 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-128P-201ENST00000383976 107 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 MTCYBP4-201ENST00000401524 249 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-370P-201ENST00000411008 104 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 CYCSP33-201ENST00000414485 327 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RPS15AP6-201ENST00000420703 385 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 Z74021.1-201ENST00000423610 407 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL359672.1-201ENST00000442302 409 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL500522.2-201ENST00000448562 343 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 U3.44-201ENST00000458938 192 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RNU7-138P-201ENST00000459479 64 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AC130509.1-201ENST00000464158 433 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AC084198.1-201ENST00000477747 402 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 HMGB3P16-201ENST00000508037 287 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RNU6-572P-201ENST00000516724 80 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AC104576.1-201ENST00000524225 88 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RPL23AP97-201ENST00000568955 471 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL133215.3-201ENST00000609801 448 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL391261.4-201ENST00000616012 481 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AC007742.2-201ENST00000618226 398 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 AL136164.4-201ENST00000625013 2135 ntBASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC163A0A0D9SF12 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC163A0A0D9SF12 AL672167.1-203ENST00000641299 2975 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 MIR412-201ENST00000362142 91 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 SNORA63.1-201ENST00000362493 131 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RNA5SP119-201ENST00000362715 117 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RNU1-83P-201ENST00000363426 164 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RNA5SP387-201ENST00000364226 106 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 SNORD73A-201ENST00000386062 65 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 AL445584.1-201ENST00000431451 330 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 FABP5P14-201ENST00000437273 393 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RNA5SP310-201ENST00000459084 116 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 SNORD19B-201ENST00000459623 84 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
CCDC163A0A0D9SF12 SNORA31.19-201ENST00000517079 126 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms