Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SNORD114-1-201ENST00000362705 72 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 SNORA25B-201ENST00000365507 128 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR504-201ENST00000385065 83 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 RPL23AP29-201ENST00000397284 453 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AL139098.1-201ENST00000407291 389 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR1283-2-201ENST00000408621 87 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 RNU6-564P-201ENST00000410983 104 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 OR51A5P-201ENST00000415429 942 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AL160275.3-201ENST00000423876 471 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC079448.1-201ENST00000449377 373 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AL590365.1-201ENST00000450788 243 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 RNA5SP445-201ENST00000515889 115 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC090821.2-201ENST00000523552 176 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC024619.4-201ENST00000580924 316 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR4672-201ENST00000583126 81 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 uc_338.14-201ENST00000613162 166 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 AC110491.1-201ENST00000562191 2010 ntBASIC0.82□□□□□ -2.28
TRAV13-2A0A0B4J235 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC002543.1-201ENST00000299783 1954 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 Y_RNA.67-201ENST00000362870 100 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL109755.1-201ENST00000401791 649 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 Z86062.1-201ENST00000406773 777 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL591704.2-201ENST00000421658 181 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL358453.1-201ENST00000422522 250 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC092648.1-201ENST00000425870 423 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 RPL31P54-201ENST00000429803 370 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 HMGB1P31-201ENST00000437242 427 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AP004247.1-201ENST00000531556 1289 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC024224.1-201ENST00000538284 609 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 YWHAZP1-201ENST00000556286 722 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC015720.1-201ENST00000565251 277 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC026271.5-201ENST00000577873 130 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL035411.2-201ENST00000604022 421 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AC242628.1-201ENST00000606810 391 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 TUG1_1.1-201ENST00000610654 145 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 AL445493.3-201ENST00000619568 477 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 SCARNA15.3-201ENST00000626315 122 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 SCARNA4.1-201ENST00000628597 123 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 GDI2P1-201ENST00000429312 1336 ntBASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV13-2A0A0B4J235 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 RNU6-60P-201ENST00000364792 103 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 SNORA22-201ENST00000383907 134 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 SNORA22C-201ENST00000384614 134 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR95-201ENST00000385072 81 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 RNU4-26P-201ENST00000410270 107 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 UBE2V1P4-201ENST00000425374 344 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL035407.1-201ENST00000429211 571 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 USP9YP24-201ENST00000434374 697 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL354941.1-201ENST00000438600 464 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 RNU1-123P-201ENST00000458950 160 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC018868.1-201ENST00000491307 315 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC139453.3-201ENST00000493276 369 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 MTCYBP18-201ENST00000501056 747 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR3683-201ENST00000580847 82 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 MIR4422-201ENST00000581938 83 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC136601.2-201ENST00000604356 474 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 BX322635.1-201ENST00000605804 496 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL050343.2-201ENST00000607338 280 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AC009318.2-201ENST00000610917 651 ntBASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV13-2A0A0B4J235 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV13-2A0A0B4J235 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV13-2A0A0B4J235 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV13-2A0A0B4J235 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV13-2A0A0B4J235 SNORA51.6-201ENST00000384151 125 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms