Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 SNORD56.4-201ENST00000363883 71 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AL356421.1-201ENST00000403255 413 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RNU2-28P-201ENST00000410457 189 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RNA5SP450-201ENST00000411206 102 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC092634.6-201ENST00000418558 192 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 PPP1R11P2-201ENST00000423543 382 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC008850.1-201ENST00000427546 362 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 UBE2V2P3-201ENST00000433562 437 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC241584.1-201ENST00000438469 1241 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 USP9YP34-201ENST00000453983 808 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RN7SL429P-201ENST00000479090 223 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RN7SL489P-201ENST00000486185 223 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RN7SL327P-201ENST00000488659 223 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC091917.2-201ENST00000505002 744 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 MTCYBP23-201ENST00000558717 1102 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC007349.4-201ENST00000608114 532 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC003001.2-201ENST00000616294 831 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 RN7SL853P-201ENST00000617250 223 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AL512506.2-201ENST00000624472 458 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC080188.3-201ENST00000624842 748 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 AC241585.2-209ENST00000638217 143 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 ZNF849P-201ENST00000594711 1566 ntBASIC1.24□□□□□ -2.21
TRAV27A0A087WT01 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 SNORD65C-201ENST00000390962 71 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 MIR888-201ENST00000401186 77 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AL133264.1-201ENST00000407157 562 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 U6atac.2-201ENST00000408644 118 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AC007742.1-201ENST00000425789 329 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 ELOCP26-201ENST00000436067 329 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AC027575.1-201ENST00000481064 460 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 RNA5SP137-201ENST00000516833 135 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 RNU6-548P-201ENST00000517083 115 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 HSPA8P13-201ENST00000523715 472 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AL359212.1-201ENST00000556608 614 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AC012435.1-202ENST00000568772 240 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AC005951.2-201ENST00000576282 495 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AP001269.3-201ENST00000588718 329 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 SEPT7P9-203ENST00000604116 343 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 AC004853.1-201ENST00000604902 698 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.23□□□□□ -2.21
TRAV27A0A087WT01 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 MIR126-201ENST00000362291 85 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 RNU1-72P-201ENST00000362976 153 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 U3.13-201ENST00000364804 214 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 RNU6-203P-201ENST00000384038 104 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 CISD1P1-201ENST00000393907 327 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 MTCO2P31-201ENST00000402702 684 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC244453.4-201ENST00000419150 388 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC246680.2-201ENST00000422106 389 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 BPY2DP-201ENST00000422208 265 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC234064.1-201ENST00000436312 247 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 VN1R10P-201ENST00000447106 875 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC013828.1-201ENST00000481845 158 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 MTCYBP35-201ENST00000503630 1137 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC008834.1-201ENST00000511612 175 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 RNA5SP291-201ENST00000517222 105 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC024619.4-201ENST00000580924 316 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 MIR4303-201ENST00000581299 66 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC103987.3-201ENST00000582071 292 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC136601.2-201ENST00000604356 474 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC022202.1-201ENST00000613515 211 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 AC004009.2-201ENST00000623016 728 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 U6.101-201ENST00000637707 76 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 ZNF72P-201ENST00000425869 1908 ntBASIC1.22□□□□□ -2.21
TRAV27A0A087WT01 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
TRAV27A0A087WT01 SNORA67.5-201ENST00000391036 107 ntBASIC1.21□□□□□ -2.22
TRAV27A0A087WT01 MIR934-201ENST00000401241 83 ntBASIC1.21□□□□□ -2.22
TRAV27A0A087WT01 TMSB4XP8-201ENST00000402089 135 ntBASIC1.21□□□□□ -2.22
TRAV27A0A087WT01 RNU2-33P-201ENST00000410344 192 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms