Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 RPL32P3-201ENST00000359025 275 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-1280P-201ENST00000365211 107 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SKP187-201ENST00000365536 330 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 SNORD73A-201ENST00000386062 65 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC016831.2-201ENST00000417179 352 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 U3.44-201ENST00000458938 192 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC034236.1-201ENST00000469891 373 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC093027.1-201ENST00000546698 429 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AC023575.1-201ENST00000580510 358 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR6128-201ENST00000615528 109 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 U7.8-201ENST00000619968 63 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 PLCE1P1-201ENST00000622094 305 ntBASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GTF3C3Q9Y5Q9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR518D-201ENST00000385014 87 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC245291.1-201ENST00000419501 328 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC012671.1-201ENST00000451912 203 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC116337.1-201ENST00000509680 687 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-711P-201ENST00000517255 106 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC104576.1-201ENST00000524225 88 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 HMGN2P15-201ENST00000585707 270 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC024153.1-201ENST00000603103 365 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AL160281.1-201ENST00000605307 311 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 AC244517.12-201ENST00000623581 663 ntBASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.74□□□□□ -1.49
GTF3C3Q9Y5Q9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-933P-201ENST00000384424 107 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RNU6-601P-201ENST00000384540 107 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR591-201ENST00000385290 95 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RAB9AP3-201ENST00000412737 573 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AC114755.2-201ENST00000413520 361 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 SAR1AP4-201ENST00000429225 591 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RAB9AP1-201ENST00000449393 573 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RPL23AP14-201ENST00000468281 468 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RN7SL481P-201ENST00000477764 299 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RPL36AP41-201ENST00000493820 306 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 IGKV2-38-201ENST00000517443 247 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AL163153.1-201ENST00000554223 283 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AC084783.1-201ENST00000565846 910 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 MIR4691-201ENST00000583764 85 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AC019193.3-201ENST00000609144 554 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AC064836.2-201ENST00000609491 462 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 AL591516.1-201ENST00000611326 274 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 U4.7-201ENST00000638126 106 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 CDC27P3-201ENST00000635418 1910 ntBASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
GTF3C3Q9Y5Q9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 UBE3AP2-201ENST00000429033 2259 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 HMGN2P8-201ENST00000391458 268 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AL355433.1-201ENST00000422804 300 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AL590632.1-201ENST00000424289 371 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 PCMTD1P1-201ENST00000455560 355 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 Y_RNA.632-201ENST00000459189 102 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 MTND4P17-201ENST00000470444 350 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 HMGN1P13-201ENST00000505795 138 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 AC008638.1-201ENST00000506035 866 ntBASIC5.72□□□□□ -1.49
GTF3C3Q9Y5Q9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms