Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 Y_RNA.70-201ENST00000362886 110 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORD113-7-201ENST00000363762 77 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL591034.1-201ENST00000407447 340 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 YPEL5P1-201ENST00000419731 367 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL645937.1-202ENST00000421799 937 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL158156.1-201ENST00000422509 473 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL365400.1-201ENST00000431854 640 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL512844.2-201ENST00000433990 593 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL23AP89-201ENST00000439324 255 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 RPS29P7-201ENST00000439662 171 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 PRPS1P1-201ENST00000445305 876 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 RPS29P19-201ENST00000479709 171 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC091951.2-201ENST00000500762 203 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 CCDC34P1-201ENST00000507441 517 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC008716.1-201ENST00000511084 513 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU2-69P-201ENST00000516061 100 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL7P20-201ENST00000520308 745 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 CYCSP27-201ENST00000527643 293 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 HMGB1P14-201ENST00000557424 591 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC091135.1-201ENST00000585943 307 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 VN1R80P-201ENST00000597126 338 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL606490.9-201ENST00000603331 271 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL136221.1-201ENST00000621449 509 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AP003400.5-201ENST00000624827 617 ntBASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA3Q9Y5H0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.378-201ENST00000365652 113 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA32.2-201ENST00000384049 122 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 RNU2-68P-201ENST00000410878 191 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 MTND3P8-201ENST00000412909 339 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 BX682237.1-201ENST00000415016 335 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AL669831.1-202ENST00000428504 417 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL23AP69-201ENST00000431134 458 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 GTF2IP13-201ENST00000438487 386 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 MTND4LP16-201ENST00000440828 295 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL7P5-201ENST00000471472 736 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AP003122.3-201ENST00000526316 255 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC084851.1-201ENST00000529105 249 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC005668.1-201ENST00000571142 476 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 FGF7P1-201ENST00000582820 288 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 AC027309.3-201ENST00000623419 351 ntBASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHGA3Q9Y5H0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 ZNF807-201ENST00000328088 1707 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA60-201ENST00000362396 134 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 Y_RNA.263-201ENST00000364659 114 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MIR670-201ENST00000390142 98 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 RNA5SP219-201ENST00000390940 113 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORA16.2-201ENST00000390991 127 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 SNORD66.1-201ENST00000391230 76 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 RPL21P90-201ENST00000415692 466 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 SNRPEP8-201ENST00000442866 260 ntBASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.93□□□□□ -1.78
PCDHGA3Q9Y5H0 MTCO3P9-201ENST00000506989 781 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms