Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-105P-201ENST00000363909 104 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 SNORD115-32-201ENST00000364079 82 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.275-201ENST00000364726 110 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-968P-201ENST00000384076 107 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-72P-201ENST00000384285 79 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-843P-201ENST00000384454 104 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.569-201ENST00000384749 103 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RPS4XP3-201ENST00000398541 413 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.590-201ENST00000410140 107 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SKP51-201ENST00000410781 304 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 MTCO1P5-201ENST00000433573 344 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 PSMD10P3-201ENST00000437000 448 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RPL12P18-201ENST00000437175 325 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC124916.1-201ENST00000444020 547 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 snoU109.2-201ENST00000459316 135 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RN7SL860P-201ENST00000473738 223 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-346P-201ENST00000516288 111 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNA5SP165-201ENST00000517142 115 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AP004371.1-201ENST00000525240 214 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 MIR4282-201ENST00000583613 67 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC011447.4-201ENST00000587562 111 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 RNA5SP108-201ENST00000605921 117 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 AC007390.2-201ENST00000606229 3803 ntBASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHB11Q9Y5F2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 ASNSP1-201ENST00000518311 1939 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RNU6-879P-201ENST00000364328 108 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 Y_RNA.240-201ENST00000364469 95 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RNU1-139P-201ENST00000391307 165 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RNU5A-5P-201ENST00000411054 116 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RNU2-61P-201ENST00000411069 191 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 COX5BP7-201ENST00000414780 274 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC098614.2-201ENST00000426040 255 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC009127.1-201ENST00000467090 155 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC006463.2-201ENST00000473326 348 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RAB9BP1-201ENST00000519581 626 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AK6P2-201ENST00000549020 471 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 RPL21P7-201ENST00000557463 483 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC040958.1-201ENST00000561102 201 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 MIR4423-201ENST00000580922 80 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC011487.3-201ENST00000593607 453 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 AC090132.2-201ENST00000615881 347 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
PCDHB11Q9Y5F2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.09□□□□□ -1.6
PCDHB11Q9Y5F2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHB11Q9Y5F2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 AL592437.2-201ENST00000421655 2434 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 AC093535.2-201ENST00000624769 2326 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 SNORA25.1-201ENST00000362326 128 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-741P-201ENST00000383889 107 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 MIR600-201ENST00000385007 98 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 RNA5SP213-201ENST00000391031 106 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 MIR1290-201ENST00000408735 78 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 RNU4-30P-201ENST00000410245 143 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-651P-201ENST00000411040 105 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 HMGN2P27-201ENST00000427352 270 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 AL049745.1-201ENST00000433953 286 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 CYCSP32-201ENST00000440548 321 ntBASIC5.08□□□□□ -1.6
PCDHB11Q9Y5F2 AL353705.4-201ENST00000449661 238 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms