Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 CUL1P1-201ENST00000509510 2425 ntBASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHB3Q9Y5E6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC006206.1-201ENST00000544842 3387 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP131-201ENST00000365452 119 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 MIR1286-201ENST00000408112 78 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 RPS27P18-201ENST00000431701 247 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AL078601.1-201ENST00000444542 271 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 LINC02210-201ENST00000444561 288 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 RNU5E-3P-201ENST00000515913 68 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF192P1-203ENST00000565888 810 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 MIR6719-201ENST00000622428 87 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 SMG1P6-201ENST00000532337 2930 ntBASIC5.44□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP319-201ENST00000362768 119 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP234-201ENST00000363916 119 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNA5SP187-201ENST00000384400 119 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 MIR514A1-201ENST00000385133 98 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-1248P-201ENST00000391096 64 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 U3.22-201ENST00000391120 215 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-460P-201ENST00000391158 108 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RPL17P36-201ENST00000420302 549 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC010095.1-201ENST00000443543 144 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC092991.1-201ENST00000477176 376 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC139453.3-201ENST00000493276 369 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-572P-201ENST00000516724 80 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC090281.1-201ENST00000523019 276 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC023043.3-201ENST00000593113 385 ntBASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB3Q9Y5E6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SAGE2P-201ENST00000420011 2126 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 RNU6-72P-201ENST00000384285 79 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SNORA70-201ENST00000384436 135 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SNORD37.2-201ENST00000391075 66 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SPTLC1P2-201ENST00000407089 121 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.595-201ENST00000410403 105 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AC138623.1-201ENST00000418060 216 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 RNF10P1-201ENST00000418589 369 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 RN7SL51P-201ENST00000468230 285 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AC100832.1-201ENST00000471945 383 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AL671862.1-201ENST00000515851 349 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 Y_RNA.712-201ENST00000517011 92 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AC090049.2-201ENST00000550377 109 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AC044860.2-201ENST00000561005 179 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 MTND5P34-201ENST00000568888 325 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 MIR5582-201ENST00000579697 68 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 LARP7P3-201ENST00000579888 337 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AL139124.1-201ENST00000609123 421 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 SCARNA4-202ENST00000625402 129 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 AL034408.1-202ENST00000636088 415 ntBASIC5.42□□□□□ -1.54
PCDHB3Q9Y5E6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms