Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC067942.3-201ENST00000512025 362 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC015795.1-201ENST00000513669 327 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 IGKV2-23-201ENST00000518729 323 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC027369.5-201ENST00000533838 755 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC010900.2-201ENST00000604508 210 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC137590.2-201ENST00000619709 240 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AP005019.3-201ENST00000620418 560 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC243829.7-201ENST00000633081 225 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC116096.1-201ENST00000566804 2314 ntBASIC5.26□□□□□ -1.57
NOD1Q9Y239 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.26□□□□□ -1.57
NOD1Q9Y239 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NOD1Q9Y239 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NOD1Q9Y239 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NOD1Q9Y239 DDX18P3-201ENST00000404856 2007 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 U3.13-201ENST00000364804 214 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 Y_RNA.785-201ENST00000384290 109 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 Y_RNA.539-201ENST00000384635 107 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 MIR215-201ENST00000384858 110 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 Z98745.1-201ENST00000402553 494 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 MTCYBP2-201ENST00000407745 171 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC140479.3-201ENST00000418944 1126 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC244098.2-201ENST00000422068 99 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AL354766.1-201ENST00000423396 542 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AL732292.1-201ENST00000426692 226 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 SDAD1P3-201ENST00000427380 333 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 H2AFZP5-201ENST00000446960 382 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC079354.2-201ENST00000453523 154 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 RN7SKP210-201ENST00000459176 261 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC109327.1-201ENST00000471666 403 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 RNA5SP290-201ENST00000517133 127 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 RNU6-709P-201ENST00000517257 104 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 ATP5F1P5-201ENST00000526403 760 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AP001781.1-201ENST00000530977 207 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC022080.3-201ENST00000544433 482 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 SRGNP1-201ENST00000603392 451 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 AC009779.6-201ENST00000603972 165 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 OR56B2P-202ENST00000641377 2453 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.25□□□□□ -1.57
NOD1Q9Y239 ZNF137P-201ENST00000456718 1920 ntBASIC5.25□□□□□ -1.57
NOD1Q9Y239 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NOD1Q9Y239 AP001148.1-201ENST00000624124 2359 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL391987.6-201ENST00000305671 199 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 MIR335-201ENST00000362173 94 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 Y_RNA.237-201ENST00000364439 102 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 RNA5SP479-201ENST00000364858 117 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 MIR190B-201ENST00000401119 79 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 RPL7AP61-201ENST00000443410 636 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL139109.1-201ENST00000455491 297 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL445433.1-201ENST00000457507 257 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AC104164.2-201ENST00000496953 495 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL359273.1-201ENST00000510918 627 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 Y_RNA.700-201ENST00000516806 100 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL137100.2-201ENST00000555786 315 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL139395.1-201ENST00000603662 160 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AL645944.1-201ENST00000603857 493 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.24□□□□□ -1.57
NOD1Q9Y239 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms